A Bayesian network driven approach to model the transcriptional response to nitric oxide in Saccharomyces cerevisiae. by Jingchun Zhu, Ashwini Jambhekar, Aaron Sarver, Joseph DeRisi

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Comparative genomics search for losses of long-established genes on the human lineage. by Jingchun Zhu, J Zachary Sanborn, Mark Diekhans, Craig B Lowe, Tom H Pringle, David Haussler

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The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum. by Zbynek Bozdech, Manuel Llinás, Brian Lee Pulliam, Edith D Wong, Jingchun Zhu, Joseph L DeRisi

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RADIA: RNA and DNA integrated analysis for somatic mutation detection. by Amie J Radenbaugh, Singer Ma, Adam Ewing, Joshua M Stuart, Eric A Collisson, Jingchun Zhu, David Haussler

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A user guide for the online exploration and visualization of PCAWG data by Mary J. Goldman, Junjun Zhang, Nuno A. Fonseca, Isidro Cortés-Ciriano, Qian Xiang, Brian Craft, Elena Piñeiro-Yáñez, Brian D. O’Connor, Wojciech Bazant, Elisabet Barrera, Alfonso Muñoz-Pomer, Robert Petryszak, Anja Füllgrabe, Fatima Al-Shahrour, Maria Keays, David Haussler, John N. Weinstein, Wolfgang Huber, Alfonso Valencia, Peter J. Park, Irene Papatheodorou, Jingchun Zhu, Vincent Ferretti, Miguel Vazquez

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