Recommendations for Processing Head CT Data by John Muschelli

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Diurnal Physical Activity Patterns across Ages in a Large UK Based Cohort: The UK Biobank Study by Julia Wrobel, John Muschelli, Andrew Leroux

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freesurfer: Connecting the Freesurfer software with R [version 1; referees: 2 approved] by John Muschelli, Elizabeth Sweeney, Ciprian M. Crainiceanu

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Moderated t-tests for group-level fMRI analysis by Guoqing Wang, John Muschelli, Martin A. Lindquist

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Rxnat: An Open-Source R Package for XNAT-Based Repositories by Adrian Gherman, John Muschelli, Brian Caffo, Ciprian Crainiceanu

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Analytic programming with FMRI data: a quick-start guide for statisticians using R. by Ani Eloyan, Shanshan Li, John Muschelli, Jim J Pekar, Stewart H Mostofsky, Brian S Caffo

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Interpreting blood GLUcose data with R package iglu. by Steven Broll, Jacek Urbanek, David Buchanan, Elizabeth Chun, John Muschelli, Naresh M Punjabi, Irina Gaynanova

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Open-source Tools for Training Resources – OTTR by Candace Savonen, Carrie Wright, Ava M. Hoffman, John Muschelli, Katherine Cox, Frederick J. Tan, Jeffrey T. Leek

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PItcHPERFeCT: Primary Intracranial Hemorrhage Probability Estimation using Random Forests on CT by John Muschelli, Elizabeth M. Sweeney, Natalie L. Ullman, Paul Vespa, Daniel F. Hanley, Ciprian M. Crainiceanu

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Open Case Studies: Statistics and Data Science Education through Real-World Applications by Carrie Wright, Qier Meng, Michael R. Breshock, Lyla Atta, Margaret A. Taub, Leah R. Jager, John Muschelli, Stephanie C. Hicks

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Comparison of Accelerometry-Based Measures of Physical Activity: Retrospective Observational Data Analysis Study by Marta Karas, John Muschelli, Andrew Leroux, Jacek K Urbanek, Amal A Wanigatunga, Jiawei Bai, Ciprian M Crainiceanu, Jennifer A Schrack

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Relating multi-sequence longitudinal intensity profiles and clinical covariates in incident multiple sclerosis lesions by Elizabeth M. Sweeney, Russell T. Shinohara, Blake E. Dewey, Matthew K. Schindler, John Muschelli, Daniel S. Reich, Ciprian M. Crainiceanu, Ani Eloyan

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A dual modeling approach to automatic segmentation of cerebral T2 hyperintensities and T1 black holes in multiple sclerosis by Alessandra M. Valcarcel, Kristin A. Linn, Fariha Khalid, Simon N. Vandekar, Shahamat Tauhid, Theodore D. Satterthwaite, John Muschelli, Melissa Lynne Martin, Rohit Bakshi, Russell T. Shinohara

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TAPAS: A Thresholding Approach for Probability Map Automatic Segmentation in Multiple Sclerosis by Alessandra M. Valcarcel, John Muschelli, Dzung L. Pham, Melissa Lynne Martin, Paul Yushkevich, Rachel Brandstadter, Kristina R. Patterson, Matthew K. Schindler, Peter A. Calabresi, Rohit Bakshi, Russell T. Shinohara

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A multi-scanner neuroimaging data harmonization using RAVEL and ComBat by Mahbaneh Eshaghzadeh Torbati, Davneet S. Minhas, Ghasan Ahmad, Erin E. O’Connor, John Muschelli, Charles M. Laymon, Zixi Yang, Ann D. Cohen, Howard J. Aizenstein, William E. Klunk, Bradley T. Christian, Seong Jae Hwang, Ciprian M. Crainiceanu, Dana L. Tudorascu

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The ANTsX ecosystem for quantitative biological and medical imaging by Nicholas J. Tustison, Philip A. Cook, Andrew J. Holbrook, Hans J. Johnson, John Muschelli, Gabriel A. Devenyi, Jeffrey T. Duda, Sandhitsu R. Das, Nicholas C. Cullen, Daniel L. Gillen, Michael A. Yassa, James R. Stone, James C. Gee, Brian B. Avants

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ModelArray: An R package for statistical analysis of fixel-wise data by Chenying Zhao, Tinashe M. Tapera, Joëlle Bagautdinova, Josiane Bourque, Sydney Covitz, Raquel E. Gur, Ruben C. Gur, Bart Larsen, Kahini Mehta, Steven L. Meisler, Kristin Murtha, John Muschelli, David R. Roalf, Valerie J. Sydnor, Alessandra M. Valcarcel, Russell T. Shinohara, Matthew Cieslak, Theodore D. Satterthwaite

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