Avian Influenza A Viruses Reassort and Diversify Differently in Mallards and Mammals by Ketaki Ganti, Anish Bagga, Juliana DaSilva, Samuel S. Shepard, John R. Barnes, Susan Shriner, Katia Koelle, Anice C. Lowen

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Influenza A Virus Multicycle Replication Yields Comparable Viral Population Emergence in Human Respiratory and Ocular Cell Types by Troy J. Kieran, Juliana DaSilva, Thomas J. Stark, Ian A. York, Claudia Pappas, John R. Barnes, Taronna R. Maines, Jessica A. Belser

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Genetic and potential antigenic evolution of influenza A(H1N1)pdm09 viruses circulating in Kenya during 2009–2018 influenza seasons by D. Collins Owuor, Zaydah R. de Laurent, Bryan O. Nyawanda, Gideon O. Emukule, Rebecca Kondor, John R. Barnes, D. James Nokes, Charles N. Agoti, Sandra S. Chaves

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Genetic drift and purifying selection shape within-host influenza A virus populations during natural swine infections. by David VanInsberghe, Dillon S McBride, Juliana DaSilva, Thomas J Stark, Max S Y Lau, Samuel S Shepard, John R Barnes, Andrew S Bowman, Anice C Lowen, Katia Koelle

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Discriminating North American Swine Influenza Viruses with a Portable, One-Step, Triplex Real-Time RT-PCR Assay, and Portable Sequencing by Marie K. Kirby, Bo Shu, Matthew W. Keller, Malania M. Wilson, Benjamin L. Rambo-Martin, Yunho Jang, Jimma Liddell, Eduardo Salinas Duron, Jacqueline M. Nolting, Andrew S. Bowman, C. Todd Davis, David E. Wentworth, John R. Barnes

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Influenza A Virus Field Surveillance at a Swine-Human Interface by Benjamin L. Rambo-Martin, Matthew W. Keller, Malania M. Wilson, Jacqueline M. Nolting, Tavis K. Anderson, Amy L. Vincent, Ujwal R. Bagal, Yunho Jang, Elizabeth B. Neuhaus, C. Todd Davis, Andrew S. Bowman, David E. Wentworth, John R. Barnes

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Targeted amplification and genetic sequencing of the severe acute respiratory syndrome coronavirus 2 surface glycoprotein by Matthew W. Keller, Lisa M. Keong, Benjamin L. Rambo-Martin, Norman Hassell, Kristine A. Lacek, Malania M. Wilson, Marie K. Kirby, Jimma Liddell, D. Collins Owuor, Mili Sheth, Joseph Madden, Justin S. Lee, Rebecca J. Kondor, David E. Wentworth, John R. Barnes

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Characterizing the Countrywide Epidemic Spread of Influenza A(H1N1)pdm09 Virus in Kenya between 2009 and 2018 by D. Collins Owuor, Zaydah R. de Laurent, Gilbert K. Kikwai, Lillian M. Mayieka, Melvin Ochieng, Nicola F. Müller, Nancy A. Otieno, Gideon O. Emukule, Elizabeth A. Hunsperger, Rebecca Garten, John R. Barnes, Sandra S. Chaves, D. James Nokes, Charles N. Agoti

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First report of human infection with avian influenza A(H9N2) virus in Oman: The need for a One Health approach by Zayid K. Almayahi, Hanan Al Kindi, C. Todd Davies, Bader Al-Rawahi, Amina Al-Jardani, Fatma Al-Yaqoubi, Yunho Jang, Joyce Jones, John R. Barnes, William Davis, Shu Bo, Brian Lynch, David E. Wentworth, Zaina Al-Maskari, Amal Al Maani, Seif Al-Abri

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Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution by John Huddleston, John R Barnes, Thomas Rowe, Xiyan Xu, Rebecca Kondor, David E Wentworth, Lynne Whittaker, Burcu Ermetal, Rodney Stuart Daniels, John W McCauley, Seiichiro Fujisaki, Kazuya Nakamura, Noriko Kishida, Shinji Watanabe, Hideki Hasegawa, Ian Barr, Kanta Subbarao, Pierre Barrat-Charlaix, Richard A Neher, Trevor Bedford

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Risk for Infection in Humans after Exposure to Birds Infected with Highly Pathogenic Avian Influenza A(H5N1) Virus, United States, 2022 by Krista Kniss, Kelsey M. Sumner, Katie J. Tastad, Nathaniel M. Lewis, Lauren Jansen, Derek Julian, Mike Reh, Emily Carlson, Robin Williams, Samir Koirala, Bryan Buss, Matthew Donahue, Jennifer Palm, Leslie Kollmann, Stacy Holzbauer, Min Z. Levine, Todd Davis, John R. Barnes, Brendan Flannery, Lynnette Brammer, Alicia Fry

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SARS-CoV-2 Delta–Omicron Recombinant Viruses, United States by Kristine A. Lacek, Benjamin L. Rambo-Martin, Dhwani Batra, Xiao-yu Zheng, Norman Hassell, Hitoshi Sakaguchi, Thomas Peacock, Natalie Groves, Matthew Keller, Malania M. Wilson, Mili Sheth, Morgan L. Davis, Mark Borroughs, Jonathan Gerhart, Samuel S. Shepard, Peter W. Cook, Justin Lee, David E. Wentworth, John R. Barnes, Rebecca Kondor, Clinton R. Paden

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Multiplex Real-Time Reverse Transcription PCR for Influenza A Virus, Influenza B Virus, and Severe Acute Respiratory Syndrome Coronavirus 2 by Bo Shu, Marie K. Kirby, William G. Davis, Christine Warnes, Jimma Liddell, Ji Liu, Kai-Hui Wu, Norman Hassell, Alvaro J. Benitez, Malania M. Wilson, Matthew W. Keller, Benjamin L. Rambo-Martin, Yamundow Camara, Jörn Winter, Rebecca J. Kondor, Bin Zhou, Stacey Spies, Laura E. Rose, Jonas M. Winchell, Brandi M. Limbago, David E. Wentworth, John R. Barnes

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Antigenic drift and subtype interference shape A(H3N2) epidemic dynamics in the United States by Amanda C Perofsky, John Huddleston, Chelsea L Hansen, John R Barnes, Thomas Rowe, Xiyan Xu, Rebecca Kondor, David E Wentworth, Nicola Lewis, Lynne Whittaker, Burcu Ermetal, Ruth Harvey, Monica Galiano, Rodney Stuart Daniels, John W McCauley, Seiichiro Fujisaki, Kazuya Nakamura, Noriko Kishida, Shinji Watanabe, Hideki Hasegawa, Sheena G Sullivan, Ian G Barr, Kanta Subbarao, Florian Krammer, Trevor Bedford, Cécile Viboud

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Antigenic Characterization of Circulating and Emerging SARS-CoV-2 Variants in the U.S. throughout the Delta to Omicron Waves by Han Di, Elizabeth A. Pusch, Joyce Jones, Nicholas A. Kovacs, Norman Hassell, Mili Sheth, Kelly Sabrina Lynn, Matthew W. Keller, Malania M. Wilson, Lisa M. Keong, Dan Cui, So Hee Park, Reina Chau, Kristine A. Lacek, Jimma D. Liddell, Marie K. Kirby, Genyan Yang, Monique Johnson, Sharmi Thor, Natosha Zanders, Chenchen Feng, Diya Surie, Jennifer DeCuir, Sandra N. Lester, Lydia Atherton, Heather Hicks, Azaibi Tamin, Jennifer L. Harcourt, Melissa M. Coughlin, Wesley H. Self, Jillian P. Rhoads, Kevin W. Gibbs, David N. Hager, Nathan I. Shapiro, Matthew C. Exline, Adam S. Lauring, Benjamin Rambo-Martin, Clinton R. Paden, Rebecca J. Kondor, Justin S. Lee, John R. Barnes, Natalie J. Thornburg, Bin Zhou, David E. Wentworth, Charles Todd Davis

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Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines by Li Wang, Markus H. Kainulainen, Nannan Jiang, Han Di, Gaston Bonenfant, Lisa Mills, Michael Currier, Punya Shrivastava-Ranjan, Brenda M. Calderon, Mili Sheth, Brian R. Mann, Jaber Hossain, Xudong Lin, Sandra Lester, Elizabeth A. Pusch, Joyce Jones, Dan Cui, Payel Chatterjee, M. Harley Jenks, Esther K. Morantz, Gloria P. Larson, Masato Hatta, Jennifer L. Harcourt, Azaibi Tamin, Yan Li, Ying Tao, Kun Zhao, Kristine Lacek, Ashley Burroughs, Wei Wang, Malania Wilson, Terianne Wong, So Hee Park, Suxiang Tong, John R. Barnes, Mark W. Tenforde, Wesley H. Self, Nathan I. Shapiro, Matthew C. Exline, D. Clark Files, Kevin W. Gibbs, David N. Hager, Manish Patel, Alison L. Halpin, Laura K. McMullan, Justin S. Lee, Hongjie Xia, Xuping Xie, Pei-Yong Shi, C. Todd Davis, Christina F. Spiropoulou, Natalie J. Thornburg, M. Steven Oberste, Vivien G. Dugan, SSEV Bioinformatics Working Group, David E. Wentworth, Bin Zhou

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