Enhancing Docking Accuracy with PECAN2, a 3D Atomic Neural Network Trained without Co-Complex Crystal Structures by Heesung Shim, Jonathan E. Allen, W. F. Drew Bennett

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Protein-ligand binding affinity prediction using multi-instance learning with docking structures by Hyojin Kim, Heesung Shim, Aditya Ranganath, Stewart He, Garrett Stevenson, Jonathan E. Allen

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Whole metagenome profiles of particulates collected from the International Space Station by Nicholas A. Be, Aram Avila-Herrera, Jonathan E. Allen, Nitin Singh, Aleksandra Checinska Sielaff, Crystal Jaing, Kasthuri Venkateswaran

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Correction: Middle East Respiratory Syndrome Coronavirus Intra-Host Populations Are Characterized by Numerous High Frequency Variants. by Monica K Borucki, Victoria Lao, Mona Hwang, Shea Gardner, Danielle Adney, Vincent Munster, Richard Bowen, Jonathan E Allen

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Ultra-deep sequencing of intra-host rabies virus populations during cross-species transmission. by Monica K Borucki, Haiyin Chen-Harris, Victoria Lao, Gilda Vanier, Debra A Wadford, Sharon Messenger, Jonathan E Allen

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Middle East Respiratory Syndrome Coronavirus Intra-Host Populations Are Characterized by Numerous High Frequency Variants. by Monica K Borucki, Victoria Lao, Mona Hwang, Shea Gardner, Danielle Adney, Vincent Munster, Richard Bowen, Jonathan E Allen

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Evaluating point-prediction uncertainties in neural networks for protein-ligand binding prediction by Ya Ju Fan, Jonathan E. Allen, Kevin S. McLoughlin, Da Shi, Brian J. Bennion, Xiaohua Zhang, Felice C. Lightstone

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HDBind: encoding of molecular structure with hyperdimensional binary representations by Derek Jones, Xiaohua Zhang, Brian J. Bennion, Sumukh Pinge, Weihong Xu, Jaeyoung Kang, Behnam Khaleghi, Niema Moshiri, Jonathan E. Allen, Tajana S. Rosing

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A novel variant of torque teno virus 7 identified in patients with Kawasaki disease. by James B Thissen, Mariko Isshiki, Crystal Jaing, Yoshiro Nagao, Dayanara Lebron Aldea, Jonathan E Allen, Masafumi Izui, Thomas R Slezak, Takafumi Ishida, Tetsuya Sano

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Multiscale analysis for patterns of Zika virus genotype emergence, spread, and consequence. by Monica K Borucki, Nicole M Collette, Lark L Coffey, Koen K A Van Rompay, Mona H Hwang, James B Thissen, Jonathan E Allen, Adam T Zemla

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Differential laboratory passaging of SARS-CoV-2 viral stocks impacts the in vitro assessment of neutralizing antibodies by Aram Avila-Herrera, Jeffrey A. Kimbrel, Jose Manuel Martí, James Thissen, Edwin A. Saada, Tracy Weisenberger, Kathryn T. Arrildt, Brent W. Segelke, Jonathan E. Allen, Adam Zemla, Monica K. Borucki

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Differential laboratory passaging of SARS-CoV-2 viral stocks impacts the in vitro assessment of neutralizing antibodies. by Aram Avila-Herrera, Jeffrey A Kimbrel, Jose Manuel Martí, James Thissen, Edwin A Saada, Tracy Weisenberger, Kathryn T Arrildt, Brent W Segelke, Jonathan E Allen, Adam Zemla, Monica K Borucki

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Predicting tumor cell line response to drug pairs with deep learning by Fangfang Xia, Maulik Shukla, Thomas Brettin, Cristina Garcia-Cardona, Judith Cohn, Jonathan E. Allen, Sergei Maslov, Susan L. Holbeck, James H. Doroshow, Yvonne A. Evrard, Eric A. Stahlberg, Rick L. Stevens

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Multiple Mutations Associated with Emergent Variants Can Be Detected as Low-Frequency Mutations in Early SARS-CoV-2 Pandemic Clinical Samples by Jeffrey Kimbrel, Joseph Moon, Aram Avila-Herrera, Jose Manuel Martí, James Thissen, Nisha Mulakken, Sarah H. Sandholtz, Tyshawn Ferrell, Chris Daum, Sara Hall, Brent Segelke, Kathryn T. Arrildt, Sharon Messenger, Debra A. Wadford, Crystal Jaing, Jonathan E. Allen, Monica K. Borucki

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A molecular portrait of maternal sepsis from Byzantine Troy by Alison M Devault, Tatum D Mortimer, Andrew Kitchen, Henrike Kiesewetter, Jacob M Enk, G Brian Golding, John Southon, Melanie Kuch, Ana T Duggan, William Aylward, Shea N Gardner, Jonathan E Allen, Andrew M King, Gerard Wright, Makoto Kuroda, Kengo Kato, Derek EG Briggs, Gino Fornaciari, Edward C Holmes, Hendrik N Poinar, Caitlin S Pepperell

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Discovery of Small-Molecule Inhibitors of SARS-CoV-2 Proteins Using a Computational and Experimental Pipeline by Edmond Y. Lau, Oscar A. Negrete, W. F. Drew Bennett, Brian J. Bennion, Monica Borucki, Feliza Bourguet, Aidan Epstein, Magdalena Franco, Brooke Harmon, Stewart He, Derek Jones, Hyojin Kim, Daniel Kirshner, Victoria Lao, Jacky Lo, Kevin McLoughlin, Richard Mosesso, Deepa K. Murugesh, Edwin A. Saada, Brent Segelke, Maxwell A. Stefan, Garrett A. Stevenson, Marisa W. Torres, Dina R. Weilhammer, Sergio Wong, Yue Yang, Adam Zemla, Xiaohua Zhang, Fangqiang Zhu, Jonathan E. Allen, Felice C. Lightstone

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