Toward a genome scale sequence specific dynamic model of cell-free protein synthesis in Escherichia coli by Nicholas Horvath, Michael Vilkhovoy, Joseph A. Wayman, Kara Calhoun, James Swartz, Jeffrey D. Varner

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Improving designer glycan production in Escherichia coli through model-guided metabolic engineering by Joseph A. Wayman, Cameron Glasscock, Thomas J. Mansell, Matthew P. DeLisa, Jeffrey D. Varner

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Alveolar epithelial progenitor cells require Nkx2-1 to maintain progenitor-specific epigenomic state during lung homeostasis and regeneration by Andrea Toth, Paranthaman Kannan, John Snowball, Matthew Kofron, Joseph A. Wayman, James P. Bridges, Emily R. Miraldi, Daniel Swarr, William J. Zacharias

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maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks. by Tareian A Cazares, Faiz W Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T Bejjani, Joseph A Wayman, Omer Donmez, Benjamin Wronowski, Sreeja Parameswaran, Leah C Kottyan, Artem Barski, Matthew T Weirauch, V B Surya Prasath, Emily R Miraldi

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