Potentials 'R'Us web-server for protein energy estimations with coarse-grained knowledge-based potentials by Kloczkowski Andrzej, Feng Yaping, Jernigan Robert L

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MAVENs: Motion analysis and visualization of elastic networks and structural ensembles by Zimmermann Michael T, Kloczkowski Andrzej, Jernigan Robert L

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Functional clustering of yeast proteins from the protein-protein interaction network by Kloczkowski Andrzej, Sen Taner Z, Jernigan Robert L

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Use of machine learning algorithms to classify binary protein sequences as highly-designable or poorly-designable by Honavar Vasant, Kloczkowski Andrzej, Peto Myron, Jernigan Robert L

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Multi-class BCGA-ELM based classifier that identifies biomarkers associated with hallmarks of cancer by Sachnev, Vasily, Saraswathi, Saras, Niaz, Rashid, Kloczkowski, Andrzej, Suresh, Sundaram

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Protein secondary structure prediction using a small training set (compact model) combined with a Complex-valued neural network approach by Rashid, Shamima, Saraswathi, Saras, Kloczkowski, Andrzej, Sundaram, Suresh, Kolinski, Andrzej

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Predicting binding sites of hydrolase-inhibitor complexes by combining several methods by Honavar Vasant, Yan Changhui, Jernigan Robert L, Kloczkowski Andrzej, Sen Taner Z, Ho Kai-Ming, Wang Cai-Zhuang, Ihm Yungok, Cao Haibo, Gu Xun, Dobbs Drena

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