Genomic Variations in Drug Resistant <i>Mycobacterium tuberculosis</i> Strains Collected from Patients with Different Localization of Infection by Ekaterina Chernyaeva, Mikhail Rotkevich, Ksenia Krasheninnikova, Alla Lapidus, Dmitrii E. Polev, Natalia Solovieva, Viacheslav Zhuravlev, Piotr Yablonsky, Stephen J. O’Brien

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Whole-Genome Analysis of Mycobacterium tuberculosis from Patients with Tuberculous Spondylitis, Russia by Ekaterina Chernyaeva, Mikhail Rotkevich, Ksenia Krasheninnikova, Andrey Yurchenko, Anna Vyazovaya, Igor Mokrousov, Natalia Solovieva, Viacheslav Zhuravlev, Piotr Yablonsky, Stephen J. O’Brien

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MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads by Marcela Uliano-Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova, Darwin Tree of Life Consortium, Giulio Formenti, Linelle Abueg, James Torrance, Eugene W. Myers, Richard Durbin, Mark Blaxter, Shane A. McCarthy

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The genome sequence of the malaria mosquito, Anopheles funestus, Giles, 1900 [version 1; peer review: 2 approved] by James Torrance, Ying Sims, Marcela Uliano-Silva, Sarah Pelan, Ousman Akone-Ella, Diego Ayala, Harriet Johnson, Pierre Kengne, Ksenia Krasheninnikova, Haynes Heaton, Joanna Collins, Alan Tracey, Damon-Lee Pointon, Katharina von Wyschetzki, Alex Makunin, Daniel Neafsey, Mara Lawniczak, Shane McCarthy, Jonathan Wood

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The genome sequence of the malaria mosquito, Anopheles funestus, Giles, 1900 [version 2; peer review: 2 approved] by James Torrance, Ying Sims, Marcela Uliano-Silva, Sarah Pelan, Ousman Akone-Ella, Diego Ayala, Harriet Johnson, Pierre Kengne, Ksenia Krasheninnikova, Haynes Heaton, Joanna Collins, Alan Tracey, Damon-Lee Pointon, Katharina von Wyschetzki, Alex Makunin, Daniel Neafsey, Mara Lawniczak, Shane McCarthy, Jonathan Wood

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A chromosomal reference genome sequence for the malaria mosquito, Anopheles moucheti, Evans, 1925 [version 1; peer review: 2 approved] by Shane A. McCarthy, Damon-Lee B. Pointon, Ying Sims, James W. Torrance, Jean-Pierre Agbor, Sandrine N. Nsango, Martin G. Wagah, Diego Ayala, Harriet F. Johnson, Jonathan M. D. Wood, Joanna C. Collins, Ksenia Krasheninnikova, Haynes Heaton, Alan Tracey, Marcela Uliano Da Silva, Katharina von Wyschetzki, Alex Makunin, Daniel E. Neafsey, Mara Lawniczak, Sarah E. Pelan

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Whole Genome Sequencing and Re-sequencing of the Sable Antelope (Hippotragus niger): A Resource for Monitoring Diversity in ex Situ and in Situ Populations by Klaus-Peter Koepfli, Gaik Tamazian, David Wildt, Pavel Dobrynin, Changhoon Kim, Paul B. Frandsen, Raquel Godinho, Andrey A. Yurchenko, Aleksey Komissarov, Ksenia Krasheninnikova, Sergei Kliver, Sofia Kolchanova, Margarida Gonçalves, Miguel Carneiro, Pedro Vaz Pinto, Nuno Ferrand, Jesús E. Maldonado, Gina M. Ferrie, Leona Chemnick, Oliver A. Ryder, Warren E. Johnson, Pierre Comizzoli, Stephen J. O’Brien, Budhan S. Pukazhenthi

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A chromosomal reference genome sequence for the malaria mosquito, Anopheles gambiae, Giles, 1902, Ifakara strain [version 1; peer review: 2 approved] by Ying Sims, Shane A. McCarthy, Damon-Lee B. Pointon, Jonathan MD Wood, James W. Torrance, Harriet Johnson, Ksenia Krasheninnikova, Haynes Heaton, Joanna Collins, Alan Tracey, Marcela Uliano Da Silva, Katharina von Wyschetzki, Alex Makunin, Daniel E. Neafsey, Mara Lawniczak, Tibebu Habtewold, Mgeni Mohamed Tambwe, Martin Wagah, Nikolai Windbichler, Sarah Moore, Sarah E. Pelan, George Christophides

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Chromosomal reference genome sequences for the malaria mosquito, Anopheles coustani, Laveran, 1900 [version 1; peer review: 2 approved] by Shane A. McCarthy, Damon-Lee B. Pointon, Jonathan M.D. Wood, Ying Sims, James W. Torrance, Mara K N Lawniczak, Marcela Uliano-Silva, Martin G. Wagah, Diego Ayala, Harriet F. Johnson, Ksenia Krasheninnikova, Haynes Heaton, Alan Tracey, Katharina von Wyschetzki, Alex Makunin, Daniel E. Neafsey, Boris K. Makanga, Lemonde B. A. Bouafou, Joanna C. Collins, Sarah E. Pelan, Nil Rahola

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A chromosomal reference genome sequence for the malaria mosquito, Anopheles marshallii, Theobald, 1903 [version 1; peer review: 2 approved] by Ying Sims, Marcela Uliano-Silva, Diego Ayala, Jonathan M. D. Wood, Ksenia Krasheninnikova, Mara K. N. Lawniczak, Haynes Heaton, Martin G. Wagah, Alan Tracey, Harriet F Johnson, Sarah E. Pelan, Joanna C. Collins, Katharina von Wyschetzki, James W. Torrance, Alex Makunin, Damon-Lee B. Pointon, Daniel E. Neafsey, Shane A. McCarthy, Boris K. Makanga, Lemonde B. A. Bouafou, Nil Rahola

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A chromosomal reference genome sequence for the malaria mosquito, Anopheles maculipalpis, Giles, 1902 [version 1; peer review: 2 approved] by Shane A. McCarthy, Damon-Lee B. Pointon, Ying Sims, James W. Torrance, Marcela Uliano-Silva, Martin G. Wagah, Diego Ayala, Jonathan M. D. Wood, Joanna C. Collins, Harriet F. Johnson, Ksenia Krasheninnikova, Mara K. N. Lawniczak, Haynes Heaton, Alan Tracey, Katharina von Wyschetzki, Alex Makunin, Daniel E. Neafsey, Boris K. Makanga, Lemonde B. A. Bouafou, Sarah E. Pelan, Nil Rahola

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A chromosomal reference genome sequence for the malaria mosquito, Anopheles gambiae, Giles, 1902, Ifakara strain [version 2; peer review: 2 approved] by Ying Sims, Shane A. McCarthy, Damon-Lee B. Pointon, Jonathan MD Wood, James W. Torrance, Harriet Johnson, Ksenia Krasheninnikova, Haynes Heaton, Joanna Collins, Alan Tracey, Mara Lawniczak, Marcela Uliano Da Silva, Katharina von Wyschetzki, Alex Makunin, Daniel E. Neafsey, Mara K.N. Lawniczak, Tibebu Habtewold, Mgeni Mohamed Tambwe, Martin Wagah, Nikolai Windbichler, Sarah Moore, Sarah E. Pelan, George Christophides

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