A Bayesian statistical analysis of human T-cell lymphotropic virus evolutionary rates by Lemey, P, Pybus, O, Dooren, S, Vandamme, A

Toward a quantitative understanding of viral phylogeography. by Faria, N, Suchard, M, Rambaut, A, Lemey, P

SERAPHIM: studying environmental rasters and phylogenetically-informed movements. by Dellicour, S, Rose, R, Faria, N, Lemey, P, Pybus, O

Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints. by Faria, N, Suchard, M, Rambaut, A, Streicker, D, Lemey, P

Simultaneously reconstructing viral crossspecies transmission history and identifying the underlying constraints by Faria, N, Suchard, M, Rambaut, A, Streicker, D, Lemey, P

Cyclorraphan yolk proteins and lepidopteran minor yolk proteins originate from two unrelated lipase families. by Hens, K, Lemey, P, Macours, N, Francis, C, Huybrechts, R

Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci. by Gill, MS, Lemey, P, Faria, N, Rambaut, A, Shapiro, B, Suchard, M

The mode and tempo of hepatitis C virus evolution within and among hosts by Gray, R, Parker, J, Lemey, P, Salemi, M, Katzourakis, A, Pybus, O

The mode and tempo of hepatitis C virus evolution within and among hosts by Gray, R, Parker, J, Lemey, P, Salemi, M, Katzourakis, A, Pybus, O

SlidingBayes: exploring recombination using a sliding window approach based on Bayesian phylogenetic inference. by Paraskevis, D, Deforche, K, Lemey, P, Magiorkinis, G, Hatzakis, A, Vandamme, A

HIV-1 p24Gag adaptation to modern and archaic HLA-allele frequency differences in ethnic groups contributes to viral subtype diversification by Kist, NC, Lambert, B, Campbell, S, Katzourakis, A, Lunn, D, Lemey, P, Iversen, AKN

Emergency of primary NNRTI resistance mutations without antiretroviral selective pressure in a HAART-treated child by Machado, E, Afonso, A, Nissley, D, Lemey, P, Cunha, S, Oliveira, R, Soares, M

Tracking virus outbreaks in the twenty-first century by Grubaugh, N, Ladner, J, Lemey, P, Pybus, O, Rambaut, A, Holmes, E, Andersen, K

Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak by Dellicour, S, Baele, G, Dudas, G, Faria, N, Pybus, O, Suchard, M, Rambaut, A, Lemey, P

Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics by Lemey, P, Pond, S, Drummond, A, Pybus, O, Shapiro, B, Barroso, H, Taveira, N, Rambaut, A

Using viral gene sequences to compare and explain the heterogeneous spatial dynamics of virus epidemics. by Dellicour, S, Rose, R, Faria, N, Vieira, L, Bourhy, H, Gilbert, M, Lemey, P, Pybus, O

Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics by Lemey, P, Kosakovsky Pond, S, Drummond, A, Pybus, O, Shapiro, B, Barroso, H, Taveira, N, Rambaut, A

Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics by Lemey, P, Kosakovsky Pond, S, Drummond, A, Pybus, O, Shapiro, B, Barroso, H, Taveira, N, Rambaut, A

Phylogenetic reconstruction of a known HIV-1 CRF04_cpx transmission network using maximum likelihood and Bayesian methods. by Paraskevis, D, Magiorkinis, E, Magiorkinis, G, Kiosses, V, Lemey, P, Vandamme, A, Rambaut, A, Hatzakis, A

Exceptional Heterogeneity in Viral Evolutionary Dynamics Characterises Chronic Hepatitis C Virus Infection. by Raghwani, J, Rose, R, Sheridan, I, Lemey, P, Suchard, M, Santantonio, T, Farci, P, Klenerman, P, Pybus, O