A Benchmark of Genetic Variant Calling Pipelines Using Metagenomic Short-Read Sequencing by Sergio Andreu-Sánchez, Sergio Andreu-Sánchez, Lianmin Chen, Lianmin Chen, Daoming Wang, Hannah E. Augustijn, Alexandra Zhernakova, Jingyuan Fu, Jingyuan Fu

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Remnant cholesterol is associated with cardiovascular mortality by Kerui Zhang, Xiangyun Qi, Fuyu Zhu, Quanbin Dong, Zhongshan Gou, Fang Wang, Li Xiao, Menghuan Li, Lianmin Chen, Lianmin Chen, Yifeng Wang, Haifeng Zhang, Haifeng Zhang, Yanhui Sheng, Yanhui Sheng, Xiangqing Kong, Xiangqing Kong

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Arginine Supply Impacts the Expression of Candidate microRNA Controlling Milk Casein Yield in Bovine Mammary Tissue by Xin Zhang, Yifan Wang, Mengzhi Wang, Gang Zhou, Lianmin Chen, Luoyang Ding, Dengpan Bu, Juan Loor

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Can Arginine Help to Improve Milk Supply in Humans? It Does in Cows by Luoyang Ding, Yizhao Shen, Tianyou Wu, Lianmin Chen, Juan J. Loor, Shane K. Maloney, Mengzhi Wang, Dominique Blache

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Jugular arginine supplementation increases lactation performance and nitrogen utilization efficiency in lactating dairy cows by Luoyang Ding, Yizhao Shen, Yifan Wang, Gang Zhou, Xin Zhang, Mengzhi Wang, Juan J. Loor, Lianmin Chen, Jun Zhang

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Arginine Alters miRNA Expression Involved in Development and Proliferation of Rat Mammary Tissue by Gang Zhou, Qiaoyun Xu, Feifan Wu, Mengzhi Wang, Lianmin Chen, Liangyu Hu, Jingwen Zhao, Juan J. Loor, Jun Zhang

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Decoding microbial genomes to understand their functional roles in human complex diseases by Yifeng Wang, Quanbin Dong, Shixian Hu, Huayiyang Zou, Tingting Wu, Jing Shi, Haifeng Zhang, Yanhui Sheng, Wei Sun, Xiangqing Kong, Lianmin Chen

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Oxidative stress gene expression, DNA methylation, and gut microbiota interaction trigger Crohn’s disease: a multi-omics Mendelian randomization study by Shu Xu, Xiaozhi Li, Shenghong Zhang, Cancan Qi, Zhenhua Zhang, Ruiqi Ma, Liyuan Xiang, Lianmin Chen, Yijun Zhu, Ce Tang, Arno R. Bourgonje, Miaoxin Li, Yao He, Zhirong Zeng, Shixian Hu, Rui Feng, Minhu Chen

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Systematic analysis of relationships between plasma branched-chain amino acid concentrations and cardiometabolic parameters: an association and Mendelian randomization study by Marwah Doestzada, Daria V. Zhernakova, Inge C. L. van den Munckhof, Daoming Wang, Alexander Kurilshikov, Lianmin Chen, Vincent W. Bloks, Martijn van Faassen, Joost H. W. Rutten, Leo A. B. Joosten, Mihai G. Netea, Cisca Wijmenga, Niels P. Riksen, Alexandra Zhernakova, Folkert Kuipers, Jingyuan Fu

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Gut microbial co-abundance networks show specificity in inflammatory bowel disease and obesity by Lianmin Chen, Valerie Collij, Martin Jaeger, Inge C. L. van den Munckhof, Arnau Vich Vila, Alexander Kurilshikov, Ranko Gacesa, Trishla Sinha, Marije Oosting, Leo A. B. Joosten, Joost H. W. Rutten, Niels P. Riksen, Ramnik J. Xavier, Folkert Kuipers, Cisca Wijmenga, Alexandra Zhernakova, Mihai G. Netea, Rinse K. Weersma, Jingyuan Fu

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Genetic and Microbial Associations to Plasma and Fecal Bile Acids in Obesity Relate to Plasma Lipids and Liver Fat Content by Lianmin Chen, Inge C.L. van den Munckhof, Kiki Schraa, Rob ter Horst, Martijn Koehorst, Martijn van Faassen, Claude van der Ley, Marwah Doestzada, Daria V. Zhernakova, Alexander Kurilshikov, Vincent W. Bloks, Albert K. Groen, Niels P. Riksen, Joost H.W. Rutten, Leo A.B. Joosten, Cisca Wijmenga, Alexandra Zhernakova, Mihai G. Netea, Jingyuan Fu, Folkert Kuipers

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