The analysis of hospital infection data using hidden Markov models. by Cooper, B, Lipsitch, M

The evolution of antibiotic resistance in a structured host population by Blanquart, F, Lehtinen, S, Lipsitch, M, Fraser, C

Inefficient cytotoxic T lymphocyte-mediated killing of HIV-1-infected cells in vivo. by Asquith, B, Edwards, C, Lipsitch, M, Mclean, A

Inefficient cytotoxic T lymphocyte-mediated killing of HIV-1-infected cells in vivo by Asquith, B, Edwards, C, Lipsitch, M, Mclean, A

Inefficient cytotoxic T lymphocyte-mediated killing of HIV-1-infected cells in vivo by Asquith, B, Edwards, C, Lipsitch, M, McLean, A

Prediction of serotypes causing invasive pneumococcal disease in unvaccinated and vaccinated populations. by Weinberger, D, Harboe, Z, Flasche, S, Scott, J, Lipsitch, M

Hedging against antiviral resistance during the next influenza pandemic using small stockpiles of an alternative chemotherapy by Wu, J, Leung, G, Lipsitch, M, Cooper, B, Riley, S

Hedging against antiviral resistance during the next influenza pandemic using small stockpiles of an alternative chemotherapy. by Wu, J, Leung, G, Lipsitch, M, Cooper, B, Riley, S

On the evolutionary ecology of multidrug resistance in bacteria. by Lehtinen, S, Blanquart, F, Lipsitch, M, Fraser, C, Maela Pneumococcal Collaboration

Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage by Lehtinen, S, Blanquart, F, Croucher, N, Turner, P, Lipsitch, M, Fraser, C

Age-specific immunoglobulin g (IgG) and IgA to pneumococcal protein antigens in a population in coastal kenya. by Laine, C, Mwangi, T, Thompson, C, Obiero, J, Lipsitch, M, Scott, J

Host population structure and treatment frequency maintain balancing selection on drug resistance. by Cobey, S, Baskerville, EB, Colijn, C, Hanage, W, Fraser, C, Lipsitch, M

Case-based surveillance of antimicrobial resistance with full susceptibility profiles. by Ryu, S, Cowling, BJ, Wu, P, Olesen, S, Fraser, C, Sun, DS, Lipsitch, M, Grad, YH

Estimating rates of carriage acquisition and clearance and competitive ability for pneumococcal serotypes in Kenya with a Markov transition model. by Lipsitch, M, Abdullahi, O, DʼAmour, A, Xie, W, Weinberger, D, Tchetgen Tchetgen, E, Scott, J

Frequency-dependent selection in vaccine-associated pneumococcal population dynamics by Corander, J, Fraser, C, Gutmann, MU, Arnold, B, Hanage, WP, Bentley, SD, Lipsitch, M, Croucher, NJ

The severity of pandemic H1N1 influenza in the United States, April - July 2009 by Presanis, A, De Angelis, D, Hagy, A, Reed, C, Riley, S, Cooper, B, Finelli, L, Biedrzycki, P, Lipsitch, M

Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae by Lehtinen, S, Chewapreecha, C, Lees, J, Hanage, W, Lipsitch, M, Croucher, N, Bentley, S, Turner, P, Fraser, C, Mostowy, R

The severity of pandemic H1N1 influenza in the United States, from April to July 2009: A Bayesian Analysis by Presanis, A, De Angelis, D, Hagy, A, Reed, C, Riley, S, Cooper, B, Finelli, L, Biedrzycki, P, Lipsitch, M

The prevalence and risk factors for pneumococcal colonization of the nasopharynx among children in Kilifi District, Kenya. by Abdullahi, O, Karani, A, Tigoi, C, Mugo, D, Kungu, S, Wanjiru, E, Jomo, J, Musyimi, R, Lipsitch, M, Scott, J

Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae by Lehtinen, S, Chewapreecha, C, Lees, J, Hanage, WP, Lipsitch, M, Croucher, NJ, Bentley, SD, Turner, P, Fraser, C, Mostowy, RJ