Complexity of pseudoknot prediction in simple models by Lyngsø, R

Complexity of comparing hidden markov models by Lyngsø, R, Pedersen, C

The consensus string problem and the complexity of comparing hidden Markov models by Lyngsø, R, Pedersen, C

RNA pseudoknot prediction in energy-based models. by Lyngsø, R, Pedersen, C

Evolving stochastic context--free grammars for RNA secondary structure prediction. by Wj Anderson, J, Tataru, P, Staines, J, Hein, J, Lyngsø, R, Anderson, J, Lyngso, R

A mini-greedy algorithm for faster structural RNA stem-loop search. by Gorodkin, J, Lyngso, R, Stormo, G

Minimum recombination histories by branch and bound by Lyngso, R, Song, Y, Hein, J

How many transcripts does it take to reconstruct the splice graph? by Jenkins, P, Lyngso, R, Hein, J

Accurate Computation of Likelihoods in the Coalescent with Recombination via Parsimony. by Lyngsø, R, Song, Y, Hein, J

Synthesising graphics card programs from DSLs. by Cartey, L, Lyngsø, R, Moor, O

Counting all possible ancestral configurations of sample sequences in population genetics. by Song, Y, Lyngsø, R, Hein, J

The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search. by Havgaard, J, Lyngsø, R, Gorodkin, J

Reconstructing the ancestral germ line methylation state of young repeats. by Feuerbach, L, Lyngsø, R, Lengauer, T, Hein, J

Synthesising graphics card programs from DSLs by Cartey, L, Lyngsø, R, de Moor, O

Pairwise local structural alignment of RNA sequences with sequence similarity less than 40%. by Havgaard, J, Lyngsø, R, Stormo, G, Gorodkin, J

Dynamics based alignment of proteins: an alternative approach to quantify dynamic similarity. by Münz, M, Lyngsø, R, Hein, J, Biggin, P

An analysis of structural influences on selection in RNA genes. by Mimouni, N, Lyngsø, R, Griffiths-Jones, S, Hein, J

StatAlign: an extendable software package for joint Bayesian estimation of alignments and evolutionary trees. by Novák, A, Miklós, I, Lyngsø, R, Hein, J

Protein Similarity Derived Solely from Molecular Dynamics by Biggin, P, Lyngso, R, Hein, J, Muenz, M

On recombination-induced multiple and simultaneous coalescent events. by Davies, J, Simancík, F, Lyngsø, R, Mailund, T, Hein, J