Extensive C->U transition biases in the genomes of a wide range of mammalian RNA viruses; potential associations with transcriptional mutations, damage- or host-mediated editing of... ‌ Peter Simmonds, M Azim Ansari

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Risk of Reactivation of Hepatitis B Virus (HBV) and Tuberculosis (TB) and Complications of Hepatitis C Virus (HCV) Following Tocilizumab Therapy: A Systematic Review to Inform Risk... ‌ Cori Campbell, Monique I. Andersson, Monique I. Andersson, M. Azim Ansari, M. Azim Ansari, Olivia Moswela, Siraj A. Misbah, Paul Klenerman, Paul Klenerman, Philippa C. Matthews, Philippa C. Matthews

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A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy ‌ Louise O. Downs, Cori Campbell, Paul Yonga, George Githinji, M. Azim Ansari, Philippa C. Matthews, Anthony O. Etyang

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A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy. ‌ Louise O Downs, Cori Campbell, Paul Yonga, George Githinji, M Azim Ansari, Philippa C Matthews, Anthony O Etyang

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Technical Validation of a Hepatitis C Virus Whole Genome Sequencing Assay for Detection of Genotype and Antiviral Resistance in the Clinical Pathway ‌ Carmen F. Manso, David F. Bibby, Kieren Lythgow, Hodan Mohamed, Richard Myers, David Williams, Renata Piorkowska, Yuen T. Chan, Rory Bowden, M. Azim Ansari, M. Azim Ansari, Camilla L. C. Ip, Eleanor Barnes, Daniel Bradshaw, Jean L. Mbisa, Jean L. Mbisa

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Case Report: Application of hepatitis B virus (HBV) deep sequencing to distinguish between acute and chronic infection [version 2; peer review: 2 approved] ‌ Louise O. Downs, Anna L. McNaughton, Mariateresa de Cesare, M. Azim Ansari, Jacqueline Martin, Charles Woodrow, Rory Bowden, Jane Collier, Eleanor Barnes, Philippa C. Matthews

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Case Report: Application of hepatitis B virus (HBV) deep sequencing to distinguish between acute and chronic infection [version 1; peer review: 2 approved] ‌ Louise O. Downs, Anna L. McNaughton, Mariateresa de Cesare, M. Azim Ansari, Jacqueline Martin, Charles Woodrow, Rory Bowden, Jane Collier, Eleanor Barnes, Philippa C. Matthews

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The Design and Development of a Multi-HBV Antigen Encoded in Chimpanzee Adenoviral and Modified Vaccinia Ankara Viral Vectors; A Novel Therapeutic Vaccine Strategy against HBV ‌ Senthil K. Chinnakannan, Tamsin N. Cargill, Timothy A. Donnison, M. Azim Ansari, Sarah Sebastian, Lian Ni Lee, Claire Hutchings, Paul Klenerman, Mala K. Maini, Tom Evans, Eleanor Barnes

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Prevalence of resistance-associated viral variants to the HIV-specific broadly neutralising antibody 10-1074 in a UK bNAb-naïve population ‌ Panagiota Zacharopoulou, Ming Lee, Ming Lee, Thiago Oliveira, John Thornhill, Nicola Robinson, Helen Brown, Sabine Kinloch, Philip Goulder, Julie Fox, Sarah Fidler, M. Azim Ansari, John Frater, John Frater

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HBV vaccination and PMTCT as elimination tools in the presence of HIV: insights from a clinical cohort and dynamic model ‌ Anna L. McNaughton, José Lourenço, Louise Hattingh, Emily Adland, Samantha Daniels, Anriette Van Zyl, Connie S. Akiror, Susan Wareing, Katie Jeffery, M. Azim Ansari, Paul Klenerman, Philip J. R. Goulder, Sunetra Gupta, Pieter Jooste, Philippa C. Matthews

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Illumina and Nanopore methods for whole genome sequencing of hepatitis B virus (HBV) ‌ Anna L. McNaughton, Hannah E. Roberts, David Bonsall, Mariateresa de Cesare, Jolynne Mokaya, Sheila F. Lumley, Tanya Golubchik, Paolo Piazza, Jacqueline B. Martin, Catherine de Lara, Anthony Brown, M. Azim Ansari, Rory Bowden, Eleanor Barnes, Philippa C. Matthews

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Viral genome wide association study identifies novel hepatitis C virus polymorphisms associated with sofosbuvir treatment failure ‌ David A. Smith, Carlota Fernandez-Antunez, Andrea Magri, Rory Bowden, Nimisha Chaturvedi, Jacques Fellay, John McLauchlan, Graham R. Foster, William L. Irving, STOP-HCV Consortium, Peter Simmonds, Vincent Pedergnana, Santseharay Ramirez, Jens Bukh, Eleanor Barnes, M. Azim Ansari

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HepFREEPak: protocol for a multi-centre, prospective observational study examining efficacy and impact of current therapies for the treatment of hepatitis C in Pakistan and reporti... ‌ Ambreen Arif, Aliya Hasnain, Auj Chaudhry, Muhammad Asim, Muhammad Nabeel Shafqat, Abeer Altaf, Noor Saba, Polychronis Kemos, M. Azim Ansari, Eleanor Barnes, Chris Metcalfe, Peter Vickerman, Huma Qureshi, Saeed Hamid, Asad Ali Choudhry, Saad Khalid Niaz, Graham R. Foster, Naheed Choudhry

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Phylogenetic Analysis of Hepatitis C Virus Infections in a Large Belgian Cohort Using Next-Generation Sequencing of Full-Length Genomes ‌ Kasper T. Christensen, Florian Pierard, David Bonsall, Rory Bowden, Eleanor Barnes, Eric Florence, M. Azim Ansari, Dung Nguyen, Mariateresa de Cesare, Frederik Nevens, Geert Robaeys, Yoeri Schrooten, Dana Busschots, Peter Simmonds, Anne-Mieke Vandamme, Eric Van Wijngaerden, Tim Dierckx, Lize Cuypers, Kristel Van Laethem

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Performance of models to predict hepatocellular carcinoma risk among UK patients with cirrhosis and cured HCV infection ‌ Hamish Innes, Peter Jepsen, Scott McDonald, John Dillon, Victoria Hamill, Alan Yeung, Jennifer Benselin, April Went, Andrew Fraser, Andrew Bathgate, M. Azim Ansari, Stephen T. Barclay, David Goldberg, Peter C. Hayes, Philip Johnson, Eleanor Barnes, William Irving, Sharon Hutchinson, Indra Neil Guha

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Evaluation of Viremia Frequencies of a Novel Human Pegivirus by Using Bioinformatic Screening and PCR ‌ David Bonsall, William F. Gregory, Camilla L.C. Ip, Sharyne Donfield, James Iles, M. Azim Ansari, Paolo Piazza, Amy Trebes, Anthony Brown, John Frater, Oliver G. Pybus, Phillip Goulder, Paul Klenerman, Rory Bowden, Edward D. Gomperts, Eleanor Barnes, Amit Kapoor, Colin P. Sharp, Peter Simmonds

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Interpreting Viral Deep Sequencing Data with GLUE ‌ Joshua B. Singer, Emma C. Thomson, Joseph Hughes, Elihu Aranday-Cortes, John McLauchlan, Ana da Silva Filipe, Lily Tong, Carmen F. Manso, Robert J. Gifford, David L. Robertson, Eleanor Barnes, M. Azim Ansari, Jean L. Mbisa, David F. Bibby, Daniel Bradshaw, David Smith

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Electronic Health Informatics Data To Describe Clearance Dynamics of Hepatitis B Surface Antigen (HBsAg) and e Antigen (HBeAg) in Chronic Hepatitis B Virus Infection ‌ Louise O. Downs, David A. Smith, Sheila F. Lumley, Meha Patel, Anna L. McNaughton, Jolynne Mokaya, M. Azim Ansari, Hizni Salih, Kinga A. Várnai, Oliver Freeman, Sarah Cripps, Jane Phillips, Jane Collier, Kerrie Woods, Keith Channon, Jim Davies, Eleanor Barnes, Katie Jeffery, Philippa C. Matthews

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Highly-Immunogenic Virally-Vectored T-cell Vaccines Cannot Overcome Subversion of the T-cell Response by HCV during Chronic Infection ‌ Leo Swadling, John Halliday, Christabel Kelly, Anthony Brown, Stefania Capone, M. Azim Ansari, David Bonsall, Rachel Richardson, Felicity Hartnell, Jane Collier, Virginia Ammendola, Mariarosaria Del Sorbo, Annette Von Delft, Cinzia Traboni, Adrian V. S. Hill, Stefano Colloca, Alfredo Nicosia, Riccardo Cortese, Paul Klenerman, Antonella Folgori, Eleanor Barnes

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Publisher Correction: Distinct patterns of within-host virus populations between two subgroups of human respiratory syncytial virus ‌ Gu-Lung Lin, Simon B. Drysdale, Matthew D. Snape, Daniel O’Connor, Anthony Brown, George MacIntyre-Cockett, Esther Mellado-Gomez, Mariateresa de Cesare, David Bonsall, M. Azim Ansari, Deniz Öner, Jeroen Aerssens, Christopher Butler, Louis Bont, Peter Openshaw, Federico Martinón-Torres, Harish Nair, Rory Bowden, RESCEU Investigators, Tanya Golubchik, Andrew J. Pollard

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