Sparse Regression Based Structure Learning of Stochastic Reaction Networks from Single Cell Snapshot Time Series. by Anna Klimovskaia, Stefan Ganscha, Manfred Claassen

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A review on deep learning applications in highly multiplexed tissue imaging data analysis by Mohammed Zidane, Ahmad Makky, Matthias Bruhns, Matthias Bruhns, Alexander Rochwarger, Sepideh Babaei, Manfred Claassen, Manfred Claassen, Christian M. Schürch

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Corrigendum: A review on deep learning applications in highly multiplexed tissue imaging data analysis by Mohammed Zidane, Ahmad Makky, Matthias Bruhns, Matthias Bruhns, Alexander Rochwarger, Sepideh Babaei, Manfred Claassen, Manfred Claassen, Christian M. Schürch

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Mixture-of-Experts Variational Autoencoder for clustering and generating from similarity-based representations on single cell data. by Andreas Kopf, Vincent Fortuin, Vignesh Ram Somnath, Manfred Claassen

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Dynamic distribution decomposition for single-cell snapshot time series identifies subpopulations and trajectories during iPSC reprogramming. by Jake P Taylor-King, Asbjørn N Riseth, Will Macnair, Manfred Claassen

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Metabolic network segmentation: A probabilistic graphical modeling approach to identify the sites and sequential order of metabolic regulation from non-targeted metabolomics data. by Andreas Kuehne, Urs Mayr, Daniel C Sévin, Manfred Claassen, Nicola Zamboni

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Privacy-preserving federated neural network learning for disease-associated cell classification by Sinem Sav, Jean-Philippe Bossuat, Juan R. Troncoso-Pastoriza, Manfred Claassen, Jean-Pierre Hubaux

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Epitope-Tagged Autotransporters as Single-Cell Reporters for Gene Expression by a Salmonella Typhimurium wbaP Mutant. by Ismeta Curkić, Monika Schütz, Philipp Oberhettinger, Médéric Diard, Manfred Claassen, Dirk Linke, Wolf-Dietrich Hardt

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Novel Blood Vascular Endothelial Subtype-Specific Markers in Human Skin Unearthed by Single-Cell Transcriptomic Profiling by Yuliang He, Carlotta Tacconi, Lothar C. Dieterich, Jihye Kim, Gaetana Restivo, Epameinondas Gousopoulos, Nicole Lindenblatt, Mitchell P. Levesque, Manfred Claassen, Michael Detmar

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Positive feedback induces switch between distributive and processive phosphorylation of Hog1 by Maximilian Mosbacher, Sung Sik Lee, Gilad Yaakov, Mariona Nadal-Ribelles, Eulàlia de Nadal, Frank van Drogen, Francesc Posas, Matthias Peter, Manfred Claassen

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Negative allosteric modulators of metabotropic glutamate receptor 3 target the stem-like phenotype of glioblastoma by Hans-Georg Wirsching, Manuela Silginer, Elisa Ventura, Will Macnair, Isabel Burghardt, Manfred Claassen, Silvia Gatti, Jürgen Wichmann, Claus Riemer, Hannah Schneider, Michael Weller

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Landscape of Exhausted Virus-Specific CD8 T Cells in Chronic LCMV Infection by Ioana Sandu, Dario Cerletti, Nathalie Oetiker, Mariana Borsa, Franziska Wagen, Ilaria Spadafora, Suzanne P.M. Welten, Ugne Stolz, Annette Oxenius, Manfred Claassen

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Author Correction: Automated Gleason grading of prostate cancer tissue microarrays via deep learning by Eirini Arvaniti, Kim S. Fricker, Michael Moret, Niels Rupp, Thomas Hermanns, Christian Fankhauser, Norbert Wey, Peter J. Wild, Jan H. Rüschoff, Manfred Claassen

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Dynamics of Melanoma-Associated Epitope-Specific CD8+ T Cells in the Blood Correlate With Clinical Outcome Under PD-1 Blockade by Andrea Gaißler, Andrea Gaißler, Trine Sundebo Meldgaard, Christina Heeke, Sepideh Babaei, Siri Amanda Tvingsholm, Jonas Bochem, Jonas Bochem, Janine Spreuer, Janine Spreuer, Teresa Amaral, Teresa Amaral, Nikolaus Benjamin Wagner, Nikolaus Benjamin Wagner, Reinhild Klein, Friedegund Meier, Friedegund Meier, Claus Garbe, Thomas K. Eigentler, Graham Pawelec, Graham Pawelec, Manfred Claassen, Manfred Claassen, Benjamin Weide, Sine Reker Hadrup, Kilian Wistuba-Hamprecht, Kilian Wistuba-Hamprecht, Kilian Wistuba-Hamprecht

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Early decrease of blood myeloid-derived suppressor cells during checkpoint inhibition is a favorable biomarker in metastatic melanoma by Teresa Amaral, Benjamin Weide, Graham Pawelec, Thomas Eigentler, Claus Garbe, Patrick Terheyden, Friedegund Meier, Kilian Wistuba-Hamprecht, Alexander Martens, Jonas Bochem, Janine Spreuer, Andrea Gaissler, Shannon Ottmann, Nikolaus Benjamin Wagner, Manfred Claassen

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Similarities and Differences of Blood N-Glycoproteins in Five Solid Carcinomas at Localized Clinical Stage Analyzed by SWATH-MS by Tatjana Sajic, Yansheng Liu, Eirini Arvaniti, Silvia Surinova, Evan G. Williams, Ralph Schiess, Ruth Hüttenhain, Atul Sethi, Sheng Pan, Teresa A. Brentnall, Ru Chen, Peter Blattmann, Betty Friedrich, Emma Niméus, Susanne Malander, Aurelius Omlin, Silke Gillessen, Manfred Claassen, Ruedi Aebersold

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Targeting extracellular and juxtamembrane FGFR2 mutations in chemotherapy-refractory cholangiocarcinoma by Michael Bitzer, Stephan Spahn, Sepideh Babaei, Marius Horger, Stephan Singer, Klaus Schulze-Osthoff, Pavlos Missios, Sergios Gatidis, Dominik Nann, Sven Mattern, Veit Scheble, Konstantin Nikolaou, Sorin Armeanu-Ebinger, Martin Schulze, Christopher Schroeder, Saskia Biskup, Janina Beha, Manfred Claassen, Kristina Ruhm, Antti Poso, Nisar P. Malek

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Expansion of extrafollicular B and T cell subsets in childhood-onset systemic lupus erythematosus by Ryan M. Baxter, Christine S. Wang, Josselyn E. Garcia-Perez, Daniel S. Kong, Brianne M. Coleman, Valentyna Larchenko, Ronald P. Schuyler, Conner Jackson, Tusharkanti Ghosh, Pratyaydipta Rudra, Debdas Paul, Manfred Claassen, Rosemary Rochford, John C. Cambier, Debashis Ghosh, Jennifer C. Cooper, Mia J. Smith, Mia J. Smith, Elena W. Y. Hsieh, Elena W. Y. Hsieh

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