Superpose3D: a local structural comparison program that allows for user-defined structure representations. by Pier Federico Gherardini, Gabriele Ausiello, Manuela Helmer-Citterich

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Exploring the landscape of tools and resources for the analysis of long non-coding RNAs by Monica Ballarino, Gerardo Pepe, Manuela Helmer-Citterich, Alessandro Palma

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Variation in the co-expression profile highlights a loss of miRNA-mRNA regulation in multiple cancer types by Gerardo Pepe, Luca Parca, Lorenzo Viviani, Gabriele Ausiello, Manuela Helmer-Citterich

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Human lncRNAs harbor conserved modules embedded in different sequence contexts by Francesco Ballesio, Gerardo Pepe, Gabriele Ausiello, Andrea Novelletto, Manuela Helmer-Citterich, Pier Federico Gherardini

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Epigenetic priming of an epithelial enhancer by p63 and CTCF controls expression of a skin-restricted gene XP33 by Artem Smirnov, Anna Maria Lena, Giulia Tosetti, Xue Yang, Angela Cappello, Manuela Helmer Citterich, Gerry Melino, Eleonora Candi

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Mapping the human phosphatome on growth pathways by Francesca Sacco, Pier Federico Gherardini, Serena Paoluzi, Julio Saez‐Rodriguez, Manuela Helmer‐Citterich, Antonella Ragnini‐Wilson, Luisa Castagnoli, Gianni Cesareni

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Role of CTCF protein in regulating FMR1 locus transcription. by Stella Lanni, Martina Goracci, Loredana Borrelli, Giorgia Mancano, Pietro Chiurazzi, Umberto Moscato, Fabrizio Ferrè, Manuela Helmer-Citterich, Elisabetta Tabolacci, Giovanni Neri

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Deciphering a global network of functionally associated post‐translational modifications by Pablo Minguez, Luca Parca, Francesca Diella, Daniel R Mende, Runjun Kumar, Manuela Helmer‐Citterich, Anne‐Claude Gavin, Vera van Noort, Peer Bork

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Unveiling the signaling network of FLT3-ITD AML improves drug sensitivity prediction by Sara Latini, Veronica Venafra, Giorgia Massacci, Valeria Bica, Simone Graziosi, Giusj Monia Pugliese, Marta Iannuccelli, Filippo Frioni, Gessica Minnella, John Donald Marra, Patrizia Chiusolo, Gerardo Pepe, Manuela Helmer Citterich, Dimitros Mougiakakos, Martin Böttcher, Thomas Fischer, Livia Perfetto, Francesca Sacco

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Clinical and functional characterization of COL2A1 p.Gly444Ser variant: From a fetal phenotype to a previously undisclosed postnatal phenotype by Enrica Marchionni, Maria Rosaria D'Apice, Viviana Lupo, Giovanna Lattanzi, Elisabetta Mattioli, Gina Lisignoli, Elena Gabusi, Gerardo Pepe, Manuela Helmer Citterich, Elena Campione, Anna Maria Nardone, Paola Spitalieri, Noemi Pucci, Dario Cocciadiferro, Eliseo Picchi, Francesco Garaci, Antonio Novelli, Giuseppe Novelli

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Inhibition of exosome biogenesis affects cell motility in heterogeneous sub-populations of paediatric-type diffuse high-grade gliomas by Giulia Pericoli, Angela Galardi, Alessandro Paolini, Lucia Lisa Petrilli, Gerardo Pepe, Alessandro Palma, Marta Colletti, Roberta Ferretti, Ezio Giorda, Stefano Levi Mortera, Anna Burford, Andrea Carai, Angela Mastronuzzi, Alan Mackay, Lorenza Putignani, Chris Jones, Luisa Pascucci, Hector Peinado, Manuela Helmer-Citterich, Emmanuel de Billy, Andrea Masotti, Franco Locatelli, Angela Di Giannatale, Maria Vinci

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A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community) [version 1; peer review: 1 approved, 3 approved with reservations] by Christine Orengo, Sameer Velankar, Shoshana Wodak, Vincent Zoete, Alexandre M.J.J. Bonvin, Arne Elofsson, K. Anton Feenstra, Dietland L. Gerloff, Thomas Hamelryck, John M. Hancock, Manuela Helmer-Citterich, Adam Hospital, Modesto Orozco, Anastassis Perrakis, Matthias Rarey, Claudio Soares, Joel L. Sussman, Janet M. Thornton, Pierre Tuffery, Gabor Tusnady, Rikkert Wierenga, Tiina Salminen, Bohdan Schneider

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