Modes of Selection in Tumors as Reflected by Two Mathematical Models and Site Frequency Spectra by Monika K. Kurpas, Marek Kimmel, Marek Kimmel

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Application of the Moran Model in Estimating Selection Coefficient of Mutated CSF3R Clones in the Evolution of Severe Congenital Neutropenia to Myeloid Neoplasia by Khanh N. Dinh, Seth J. Corey, Marek Kimmel, Marek Kimmel

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Interactions of Neanderthals and Modern Humans: What Can Be Inferred from Mitochondrial DNA? by Krzysztof A. Cyran, Marek Kimmel

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Analysis of two mechanisms of telomere maintenance based on the theory of g-Networks and stochastic automata networks by Kyung Hyun Lee, Marek Kimmel

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On Fitting Of Mathematical Models Of Cell Signaling Pathways Using Adjoint Systems by Krzysztof Fujarewicz, Marek Kimmel, Andrzej Swierniak

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Detection and characterization of constitutive replication origins defined by DNA polymerase epsilon by Roman Jaksik, David A. Wheeler, Marek Kimmel

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Coalescence computations for large samples drawn from populations of time-varying sizes. by Andrzej Polanski, Agnieszka Szczesna, Mateusz Garbulowski, Marek Kimmel

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Genomic Analysis of SARS-CoV-2 Alpha, Beta and Delta Variants of Concern Uncovers Signatures of Neutral and Non-Neutral Evolution by Monika Klara Kurpas, Roman Jaksik, Pawel Kuś, Marek Kimmel

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Correction: Kurpas et al. Genomic Analysis of SARS-CoV-2 Alpha, Beta and Delta Variants of Concern Uncovers Signatures of Neutral and Non-Neutral Evolution. <i>Viruses</i> 2022, <i... by Monika Klara Kurpas, Roman Jaksik, Pawel Kuś, Marek Kimmel

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Modeling the natural history and detection of lung cancer based on smoking behavior. by Xing Chen, Millennia Foy, Marek Kimmel, Olga Y Gorlova

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Mathematical model predicts response to chemotherapy in advanced non-resectable non-small cell lung cancer patients treated with platinum-based doublet. by Emilia Kozłowska, Rafał Suwiński, Monika Giglok, Andrzej Świerniak, Marek Kimmel

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Mathematical modelling reveals unexpected inheritance and variability patterns of cell cycle parameters in mammalian cells. by Marzena Mura, Céline Feillet, Roberto Bertolusso, Franck Delaunay, Marek Kimmel

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Predicting time to relapse in acute myeloid leukemia through stochastic modeling of minimal residual disease based on clonality data by Khanh N. Dinh, Roman Jaksik, Seth J. Corey, Marek Kimmel

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A mathematical model as a tool to identify microRNAs with highest impact on transcriptome changes by Marzena Mura, Roman Jaksik, Anna Lalik, Krzysztof Biernacki, Marek Kimmel, Joanna Rzeszowska-Wolny, Krzysztof Fujarewicz

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Genomic trajectory in leukemogenesis of myeloproliferative neoplasms: a case report by Yujie Chen, Rafee Talukder, Brian Y. Merritt, Katherine Y. King, Marek Kimmel, Gustavo Rivero, Romina Sosa

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Mutation, drift and selection in single-driver hematologic malignancy: Example of secondary myelodysplastic syndrome following treatment of inherited neutropenia. by Tomasz Wojdyla, Hrishikesh Mehta, Taly Glaubach, Roberto Bertolusso, Marta Iwanaszko, Rosemary Braun, Seth J Corey, Marek Kimmel

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Quantitative analysis reveals crosstalk mechanisms of heat shock-induced attenuation of NF-κB signaling at the single cell level. by Małgorzata Kardyńska, Anna Paszek, Jarosław Śmieja, David Spiller, Wiesława Widłak, Michael R H White, Pawel Paszek, Marek Kimmel

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Transcriptional responses to direct and indirect TGFB1 stimulation in cancerous and noncancerous mammary epithelial cells by Patryk Janus, Paweł Kuś, Roman Jaksik, Natalia Vydra, Agnieszka Toma-Jonik, Michalina Gramatyka, Monika Kurpas, Marek Kimmel, Wiesława Widłak

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Dynamic cross talk model of the epithelial innate immune response to double-stranded RNA stimulation: coordinated dynamics emerging from cell-level noise. by Roberto Bertolusso, Bing Tian, Yingxin Zhao, Leoncio Vergara, Aqeeb Sabree, Marta Iwanaszko, Tomasz Lipniacki, Allan R Brasier, Marek Kimmel

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Initial medical attention on patients with early-stage non-small cell lung cancer. by Xing Chen, Ivan P Gorlov, Jun Ying, Kelly W Merriman, Marek Kimmel, Charles Lu, Cielito C Reyes-Gibby, Olga Y Gorlova

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