Crosstalk between Metabolite Production and Signaling Activity in Breast Cancer by Cankut Çubuk, Carlos Loucera, María Peña-Chilet, Joaquin Dopazo

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Towards a metagenomics machine learning interpretable model for understanding the transition from adenoma to colorectal cancer by Carlos S. Casimiro-Soriguer, Carlos Loucera, María Peña-Chilet, Joaquin Dopazo

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Mechanistic Models of Signaling Pathways Reveal the Drug Action Mechanisms behind Gender-Specific Gene Expression for Cancer Treatments by Cankut Çubuk, Fatma E. Can, María Peña-Chilet, Joaquín Dopazo

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Functional Profiling of Soft Tissue Sarcoma Using Mechanistic Models by Miriam Payá-Milans, María Peña-Chilet, Carlos Loucera, Marina Esteban-Medina, Joaquín Dopazo

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Drug repurposing for COVID-19 using machine learning and mechanistic models of signal transduction circuits related to SARS-CoV-2 infection by Carlos Loucera, Marina Esteban-Medina, Kinza Rian, Matías M. Falco, Joaquín Dopazo, María Peña-Chilet

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The mechanistic functional landscape of retinitis pigmentosa: a machine learning-driven approach to therapeutic target discovery by Marina Esteban-Medina, Carlos Loucera, Kinza Rian, Sheyla Velasco, Lorena Olivares-González, Regina Rodrigo, Joaquin Dopazo, Maria Peña-Chilet

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A versatile workflow to integrate RNA-seq genomic and transcriptomic data into mechanistic models of signaling pathways. by Martín Garrido-Rodriguez, Daniel Lopez-Lopez, Francisco M Ortuno, María Peña-Chilet, Eduardo Muñoz, Marco A Calzado, Joaquin Dopazo

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Real-world evidence with a retrospective cohort of 15,968 COVID-19 hospitalized patients suggests 21 new effective treatments by Carlos Loucera, Rosario Carmona, Marina Esteban-Medina, Gerrit Bostelmann, Dolores Muñoyerro-Muñiz, Román Villegas, María Peña-Chilet, Joaquín Dopazo

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drexml: A command line tool and Python package for drug repurposing by Marina Esteban-Medina, Víctor Manuel de la Oliva Roque, Sara Herráiz-Gil, María Peña-Chilet, Joaquín Dopazo, Carlos Loucera

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Breast Cancer in Very Young Patients in a Spanish Cohort: Age as an Independent Bad Prognostic Indicator by María Teresa Martínez, Sara S Oltra, María Peña-Chilet, Elisa Alonso, Cristina Hernando, Octavio Burgues, Isabel Chirivella, Begoña Bermejo, Ana Lluch, Gloria Ribas

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rs12512631 on the group specific complement (vitamin D-binding protein GC) implicated in melanoma susceptibility. by Maria Peña-Chilet, Maider Ibarrola-Villava, Manuel Martin-González, Marta Feito, Cristina Gomez-Fernandez, Dolores Planelles, Gregorio Carretero, Ana Lluch, Eduardo Nagore, Gloria Ribas

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Mechanistic modeling of the SARS-CoV-2 disease map by Kinza Rian, Marina Esteban-Medina, Marta R. Hidalgo, Cankut Çubuk, Matias M. Falco, Carlos Loucera, Devrim Gunyel, Marek Ostaszewski, María Peña-Chilet, Joaquín Dopazo

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An SPM-Enriched Marine Oil Supplement Shifted Microglia Polarization toward M2, Ameliorating Retinal Degeneration in <i>rd10</i> Mice by Lorena Olivares-González, Sheyla Velasco, Idoia Gallego, Marina Esteban-Medina, Gustavo Puras, Carlos Loucera, Alicia Martínez-Romero, María Peña-Chilet, José Luis Pedraz, Regina Rodrigo

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Visualization of automatically combined disease maps and pathway diagrams for rare diseases by Piotr Gawron, David Hoksza, David Hoksza, Janet Piñero, Janet Piñero, Janet Piñero, Maria Peña-Chilet, Maria Peña-Chilet, Marina Esteban-Medina, Jose Luis Fernandez-Rueda, Vincenza Colonna, Vincenza Colonna, Ewa Smula, Laurent Heirendt, François Ancien, Valentin Groues, Venkata P. Satagopam, Reinhard Schneider, Joaquin Dopazo, Joaquin Dopazo, Laura I. Furlong, Laura I. Furlong, Laura I. Furlong, Marek Ostaszewski

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A Comprehensive Analysis of 21 Actionable Pharmacogenes in the Spanish Population: From Genetic Characterisation to Clinical Impact by Rocio Nunez-Torres, Guillermo Pita, María Peña-Chilet, Daniel López-López, Jorge Zamora, Gema Roldán, Belén Herráez, Nuria Álvarez, María Rosario Alonso, Joaquín Dopazo, Anna Gonzalez-Neira

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Real world evidence of calcifediol or vitamin D prescription and mortality rate of COVID-19 in a retrospective cohort of hospitalized Andalusian patients by Carlos Loucera, María Peña-Chilet, Marina Esteban-Medina, Dolores Muñoyerro-Muñiz, Román Villegas, Jose Lopez-Miranda, Jesus Rodriguez-Baño, Isaac Túnez, Roger Bouillon, Joaquin Dopazo, Jose Manuel Quesada Gomez

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Mutational Characterization of Cutaneous Melanoma Supports Divergent Pathways Model for Melanoma Development by David Millán-Esteban, María Peña-Chilet, Zaida García-Casado, Esperanza Manrique-Silva, Celia Requena, José Bañuls, Jose Antonio López-Guerrero, Aranzazu Rodríguez-Hernández, Víctor Traves, Joaquín Dopazo, Amaya Virós, Rajiv Kumar, Eduardo Nagore

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HDAC5 Inhibitors as a Potential Treatment in Breast Cancer Affecting Very Young Women by Sara S. Oltra, Juan Miguel Cejalvo, Eduardo Tormo, Marta Albanell, Ana Ferrer, Marta Nacher, Begoña Bermejo, Cristina Hernando, Isabel Chirivella, Elisa Alonso, Octavio Burgués, Maria Peña-Chilet, Pilar Eroles, Ana Lluch, Gloria Ribas, María Teresa Martinez

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A crowdsourcing database for the copy-number variation of the Spanish population by Daniel López-López, Gema Roldán, Jose L. Fernández-Rueda, Gerrit Bostelmann, Rosario Carmona, Virginia Aquino, Javier Perez-Florido, Francisco Ortuño, Guillermo Pita, Rocío Núñez-Torres, Anna González-Neira, CSVS Crowdsourcing Group, María Peña-Chilet, Joaquin Dopazo

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A comprehensive database for integrated analysis of omics data in autoimmune diseases by Jordi Martorell-Marugán, Raúl López-Domínguez, Adrián García-Moreno, Daniel Toro-Domínguez, Juan Antonio Villatoro-García, Guillermo Barturen, Adoración Martín-Gómez, Kevin Troule, Gonzalo Gómez-López, Fátima Al-Shahrour, Víctor González-Rumayor, María Peña-Chilet, Joaquín Dopazo, Julio Sáez-Rodríguez, Marta E. Alarcón-Riquelme, Pedro Carmona-Sáez

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