SpottedPy quantifies relationships between spatial transcriptomic hotspots and uncovers environmental cues of epithelial-mesenchymal plasticity in breast cancer by Eloise Withnell, Maria Secrier

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HistoMIL: A Python package for training multiple instance learning models on histopathology slides by Shi Pan, Maria Secrier

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Distinct patterns of proteostasis network gene expression are associated with different prognoses in melanoma patients by Rachel Wellman, Daniel Jacobson, Maria Secrier, John Labbadia

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Multi-scale characterisation of homologous recombination deficiency in breast cancer by Daniel H. Jacobson, Shi Pan, Jasmin Fisher, Maria Secrier

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Genomic and microenvironmental heterogeneity shaping epithelial-to-mesenchymal trajectories in cancer by Guidantonio Malagoli Tagliazucchi, Anna J. Wiecek, Eloise Withnell, Maria Secrier

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Immune evasion impacts the landscape of driver genes during cancer evolution by Lucie Gourmet, Andrea Sottoriva, Simon Walker-Samuel, Maria Secrier, Luis Zapata

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An image-based screen for secreted proteins involved in breast cancer G0 cell cycle arrest by William A. Weston, Jordan A. Holt, Anna J. Wiecek, James Pilling, Lovisa Holmberg Schiavone, David M. Smith, Maria Secrier, Alexis R. Barr

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Mutational signature dynamics shaping the evolution of oesophageal adenocarcinoma by Sujath Abbas, Oriol Pich, Ginny Devonshire, Shahriar A. Zamani, Annalise Katz-Summercorn, Sarah Killcoyne, Calvin Cheah, Barbara Nutzinger, Nicola Grehan, Nuria Lopez-Bigas, OCCAMS Consortium, Rebecca C. Fitzgerald, Maria Secrier

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Genomic hallmarks and therapeutic implications of G0 cell cycle arrest in cancer by Anna J. Wiecek, Stephen J. Cutty, Daniel Kornai, Mario Parreno-Centeno, Lucie E. Gourmet, Guidantonio Malagoli Tagliazucchi, Daniel H. Jacobson, Ping Zhang, Lingyun Xiong, Gareth L. Bond, Alexis R. Barr, Maria Secrier

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