Novel Cytonuclear Combinations Modify Arabidopsis thaliana Seed Physiology and Vigor by Clément Boussardon, Marie-Laure Martin-Magniette, Marie-Laure Martin-Magniette, Marie-Laure Martin-Magniette, Béatrice Godin, Abdelilah Benamar, Benjamin Vittrant, Sylvie Citerne, Tristan Mary-Huard, Tristan Mary-Huard, David Macherel, Loïc Rajjou, Françoise Budar

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DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models by Ilana Lambert, Christine Paysant-Le Roux, Stefano Colella, Marie-Laure Martin-Magniette

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Identification of a Transcriptomic Prognostic Signature by Machine Learning Using a Combination of Small Cohorts of Prostate Cancer by Benjamin Vittrant, Benjamin Vittrant, Mickael Leclercq, Mickael Leclercq, Marie-Laure Martin-Magniette, Marie-Laure Martin-Magniette, Colin Collins, Colin Collins, Alain Bergeron, Alain Bergeron, Yves Fradet, Yves Fradet, Arnaud Droit, Arnaud Droit

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Large-Scale Automatic Feature Selection for Biomarker Discovery in High-Dimensional OMICs Data by Mickael Leclercq, Mickael Leclercq, Benjamin Vittrant, Benjamin Vittrant, Marie Laure Martin-Magniette, Marie Laure Martin-Magniette, Marie Pier Scott Boyer, Marie Pier Scott Boyer, Olivier Perin, Alain Bergeron, Alain Bergeron, Yves Fradet, Yves Fradet, Arnaud Droit, Arnaud Droit

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Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27. by Franziska Turck, François Roudier, Sara Farrona, Marie-Laure Martin-Magniette, Elodie Guillaume, Nicolas Buisine, Séverine Gagnot, Robert A Martienssen, George Coupland, Vincent Colot

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Transcriptome analysis describing new immunity and defense genes in peripheral blood mononuclear cells of rheumatoid arthritis patients. by Vitor Hugo Teixeira, Robert Olaso, Marie-Laure Martin-Magniette, Sandra Lasbleiz, Laurent Jacq, Catarina Resende Oliveira, Pascal Hilliquin, Ivo Gut, François Cornelis, Elisabeth Petit-Teixeira

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Involvement of SUT1 and SUT2 Sugar Transporters in the Impairment of Sugar Transport and Changes in Phloem Exudate Contents in Phytoplasma-Infected Plants by Federica De Marco, Brigitte Batailler, Michael R. Thorpe, Frédérique Razan, Rozenn Le Hir, Françoise Vilaine, Alain Bouchereau, Marie-Laure Martin-Magniette, Sandrine Eveillard, Sylvie Dinant

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Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo by Kaori Sakai, Ludivine Taconnat, Nero Borrega, Jennifer Yansouni, Véronique Brunaud, Christine Paysant-Le Roux, Etienne Delannoy, Marie-Laure Martin Magniette, Loïc Lepiniec, Jean Denis Faure, Sandrine Balzergue, Bertrand Dubreucq

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A gene-phenotype network based on genetic variability for drought responses reveals key physiological processes in controlled and natural environments. by David Rengel, Sandrine Arribat, Pierre Maury, Marie-Laure Martin-Magniette, Thibaut Hourlier, Marion Laporte, Didier Varès, Sébastien Carrère, Philippe Grieu, Sandrine Balzergue, Jérôme Gouzy, Patrick Vincourt, Nicolas B Langlade

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The Consequences of a Disruption in Cyto-Nuclear Coadaptation on the Molecular Response to a Nitrate Starvation in Arabidopsis by Fabien Chardon, Gwendal Cueff, Etienne Delannoy, Fabien Aubé, Aurélia Lornac, Magali Bedu, Françoise Gilard, Stéphanie Pateyron, Hélène Rogniaux, Audrey Gargaros, Hakim Mireau, Loïc Rajjou, Marie-Laure Martin-Magniette, Françoise Budar

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Gene expression predictions and networks in natural populations supports the omnigenic theory by Aurélien Chateigner, Marie-Claude Lesage-Descauses, Odile Rogier, Véronique Jorge, Jean-Charles Leplé, Véronique Brunaud, Christine Paysant-Le Roux, Ludivine Soubigou-Taconnat, Marie-Laure Martin-Magniette, Leopoldo Sanchez, Vincent Segura

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The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana. by Heike Lange, Hélène Zuber, François M Sement, Johana Chicher, Lauriane Kuhn, Philippe Hammann, Véronique Brunaud, Caroline Bérard, Nathalie Bouteiller, Sandrine Balzergue, Sébastien Aubourg, Marie-Laure Martin-Magniette, Hervé Vaucheret, Dominique Gagliardi

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Immune-focused multi-omics analysis of prostate cancer: leukocyte Ig-Like receptors are associated with disease progression by Benjamin Vittrant, Alain Bergeron, Oscar Eduardo Molina, Mickael Leclercq, Xavier-Philippe Légaré, Hélène Hovington, Valérie Picard, Marie-Laure Martin-Magniette, Julie Livingstone, Paul C. Boutros, Colin Collins, Yves Fradet, Arnaud Droit

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A systems biology approach uncovers a gene co-expression network associated with cell wall degradability in maize. by Clément Cuello, Aurélie Baldy, Véronique Brunaud, Johann Joets, Etienne Delannoy, Marie-Pierre Jacquemot, Lucy Botran, Yves Griveau, Cécile Guichard, Ludivine Soubigou-Taconnat, Marie-Laure Martin-Magniette, Philippe Leroy, Valérie Méchin, Matthieu Reymond, Sylvie Coursol

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Genomic approach to study floral development genes in Rosa sp. by Annick Dubois, Arnaud Remay, Olivier Raymond, Sandrine Balzergue, Aurélie Chauvet, Marion Maene, Yann Pécrix, Shu-Hua Yang, Julien Jeauffre, Tatiana Thouroude, Véronique Boltz, Marie-Laure Martin-Magniette, Stéphane Janczarski, Fabrice Legeai, Jean-Pierre Renou, Philippe Vergne, Manuel Le Bris, Fabrice Foucher, Mohammed Bendahmane

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