Causal Biological Network Model for Inflammasome Signaling Applied for Interpreting Transcriptomic Changes in Various Inflammatory States by Hasmik Yepiskoposyan, Manuel C. Peitsch, Marja Talikka

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NPA: an R package for computing network perturbation amplitudes using gene expression data and two-layer networks by Florian Martin, Sylvain Gubian, Marja Talikka, Julia Hoeng, Manuel C. Peitsch

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A Meta-Analysis of the Performance of a Blood-Based Exposure Response Gene Signature Across Clinical Studies on the Tobacco Heating System 2.2 (THS 2.2) by Florian Martin, Marja Talikka, Nikolai V. Ivanov, Christelle Haziza, Julia Hoeng, Manuel C. Peitsch

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Construction of a Suite of Computable Biological Network Models Focused on Mucociliary Clearance in the Respiratory Tract by Hasmik Yepiskoposyan, Marja Talikka, Stefano Vavassori, Florian Martin, Alain Sewer, Sylvain Gubian, Karsta Luettich, Manuel Claude Peitsch, Julia Hoeng

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Mechanistic Evaluation of the Impact of Smoking and Chronic Obstructive Pulmonary Disease on the Nasal Epithelium by Marja Talikka, Florian Martin, Alain Sewer, Grégory Vuillaume, Patrice Leroy, Karsta Luettich, Nveed Chaudhary, Michael J Peck, Manuel C Peitsch, Julia Hoeng

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Systems biology approach highlights mechanistic differences between Crohn’s disease and ulcerative colitis by Pedro A. Ruiz Castro, Hasmik Yepiskoposyan, Sylvain Gubian, Florian Calvino-Martin, Ulrike Kogel, Kasper Renggli, Manuel C. Peitsch, Julia Hoeng, Marja Talikka

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Systems Toxicology Approach for Assessing Developmental Neurotoxicity in Larval Zebrafish by Roman A. Li, Roman A. Li, Marja Talikka, Sylvain Gubian, Colette vom Berg, Florian Martin, Manuel C. Peitsch, Julia Hoeng, Anze Zupanic, Anze Zupanic

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Tobacco Alkaloid Assessment in a DSS-Induced Colitis Mouse Model with a Fully Humanized Immune System by Catherine Verhaeghe, Marja Talikka, Alain Sewer, Nicolas Sierro, Mehdi Auberson, Dariusz Peric, David Bornand, Remi Dulize, Emmanuel Guedj, Patrick Nef, Sebastien P. Tabruyn, Julia Hoeng, Manuel C. Peitsch, Giuseppe Lo Sasso

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Construction of a Computable Network Model for DNA Damage, Autophagy, Cell Death, and Senescence by Stephan Gebel, Rosemarie B. Lichtner, Brian Frushour, Walter K. Schlage, Vy Hoang, Marja Talikka, Arnd Hengstermann, Carole Mathis, Emilija Veljkovic, Michael Peck, Manuel C. Peitsch, Renee Deehan, Julia Hoeng, Jurjen W. Westra

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Construction of a Computable Network Model for DNA Damage, Autophagy, Cell Death, and Senescence by Stephan Gebel, Rosemarie B. Lichtner, Brian Frushour, Walter K. Schlage, Vy Hoang, Marja Talikka, Arnd Hengstermann, Carole Mathis, Emilija Veljkovic, Michael Peck, Manuel C. Peitsch, Renee Deehan, Julia Hoeng, Jurjen W. Westra

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A Modular Cell-Type Focused Inflammatory Process Network Model for Non-Diseased Pulmonary Tissue by Jurjen W. Westra, Walter K. Schlage, Arnd Hengstermann, Stephan Gebel, Carole Mathis, Ty Thomson, Ben Wong, Vy Hoang, Emilija Veljkovic, Michael Peck, Rosemarie B. Lichtner, Dirk Weisensee, Marja Talikka, Renee Deehan, Julia Hoeng, Manuel C. Peitsch

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A Modular Cell-Type Focused Inflammatory Process Network Model for Non-Diseased Pulmonary Tissue by Jurjen W. Westra, Walter K. Schlage, Arnd Hengstermann, Stephan Gebel, Carole Mathis, Ty Thomson, Ben Wong, Vy Hoang, Emilija Veljkovic, Michael Peck, Rosemarie B. Lichtner, Dirk Weisensee, Marja Talikka, Renee Deehan, Julia Hoeng, Manuel C. Peitsch

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On Crowd-verification of Biological Networks by Sam Ansari, Jean Binder, Stephanie Boue, Anselmo Di Fabio, William Hayes, Julia Hoeng, Anita Iskandar, Robin Kleiman, Raquel Norel, Bruce O'neel, Manuel C. Peitsch, Carine Poussin, Dexter Pratt, Kahn Rhrissorrakrai, Walter K. Schlage, Gustavo Stolovitzky, Marja Talikka

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On Crowd-verification of Biological Networks by Carine Poussin, Dexter Pratt, Marja Talikka, Kahn Rhrissorrakrai, Walter K. Schlage, Gustavo Stolovitzky, Stephanie Boue, Anselmo Di Fabio, William Hayes, Julia Hoeng, Anita Iskandar, Robin Kleiman, Raquel Norel, Bruce O'Neel, Manuel C. Peitsch, The sbv IMPROVER project team (in alphabetical order): Sam Ansari, Jean Binder

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Enhancement of COPD biological networks using a web-based collaboration interface [v2; ref status: indexed, http://f1000r.es/5ew] by The sbv IMPROVER project team (in alphabetical order), Stephanie Boue, Brett Fields, Julia Hoeng, Jennifer Park, Manuel C. Peitsch, Walter K. Schlage, Marja Talikka, The Challenge Best Performers (in alphabetical order), Ilona Binenbaum, Vladimir Bondarenko, Oleg V. Bulgakov, Vera Cherkasova, Norberto Diaz-Diaz, Larisa Fedorova, Svetlana Guryanova, Julia Guzova, Galina Igorevna Koroleva, Elena Kozhemyakina, Rahul Kumar, Noa Lavid, Qingxian Lu, Swapna Menon, Yael Ouliel, Samantha C. Peterson, Alexander Prokhorov, Edward Sanders, Sarah Schrier, Golan Schwaitzer Neta, Irina Shvydchenko, Aravind Tallam, Gema Villa-Fombuena, John Wu, Ilya Yudkevich, Mariya Zelikman

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