Using Computational Drug-Gene Analysis to Identify Novel Therapeutic Candidates for Retinal Neuroprotection by Edward Xie, Urooba Nadeem, Bingqing Xie, Mark D’Souza, Dinanath Sulakhe, Dimitra Skondra

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Identifying novel candidate compounds for therapeutic strategies in retinopathy of prematurity via computational drug-gene association analysis by Edward F. Xie, Sarah Hilkert Rodriguez, Bingqing Xie, Mark D’Souza, Gonnah Reem, Dinanath Sulakhe, Dimitra Skondra

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A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE. by Kevin P Keegan, William L Trimble, Jared Wilkening, Andreas Wilke, Travis Harrison, Mark D'Souza, Folker Meyer

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High-Fat Diet Alters the Retinal Pigment Epithelium and Choroidal Transcriptome in the Absence of Gut Microbiota by Jason Xiao, Bingqing Xie, David Dao, Melanie Spedale, Mark D’Souza, Betty Theriault, Seenu M. Hariprasad, Dinanath Sulakhe, Eugene B. Chang, Dimitra Skondra

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High-Fat Diet Alters the Retinal Transcriptome in the Absence of Gut Microbiota by David Dao, Bingqing Xie, Urooba Nadeem, Jason Xiao, Asad Movahedan, Mark D’Souza, Vanessa Leone, Seenu M. Hariprasad, Eugene B. Chang, Dinanath Sulakhe, Dimitra Skondra

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A RESTful API for accessing microbial community data for MG-RAST. by Andreas Wilke, Jared Bischof, Travis Harrison, Tom Brettin, Mark D'Souza, Wolfgang Gerlach, Hunter Matthews, Tobias Paczian, Jared Wilkening, Elizabeth M Glass, Narayan Desai, Folker Meyer

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Absence of Gut Microbiota Is Associated with RPE/Choroid Transcriptomic Changes Related to Age-Related Macular Degeneration Pathobiology and Decreased Choroidal Neovascularization by Jason Y. Zhang, Bingqing Xie, Hugo Barba, Urooba Nadeem, Asadolah Movahedan, Nini Deng, Melanie Spedale, Mark D’Souza, Wendy Luo, Vanessa Leone, Eugene B. Chang, Betty Theriault, Dinanath Sulakhe, Dimitra Skondra

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Unique somatic variants in DNA from urine exosomes of individuals with bladder cancer by Xunian Zhou, Paul Kurywchak, Kerri Wolf-Dennen, Sara P.Y. Che, Dinanath Sulakhe, Mark D’Souza, Bingqing Xie, Natalia Maltsev, T. Conrad Gilliam, Chia-Chin Wu, Kathleen M. McAndrews, Valerie S. LeBleu, David J. McConkey, Olga V. Volpert, Shanna M. Pretzsch, Bogdan A. Czerniak, Colin P. Dinney, Raghu Kalluri

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Plasma metabolites with mechanistic and clinical links to the neurovascular disease cavernous angioma by Abhinav Srinath, Bingqing Xie, Ying Li, Je Yeong Sone, Sharbel Romanos, Chang Chen, Anukriti Sharma, Sean Polster, Pieter C. Dorrestein, Kelly C. Weldon, Dorothy DeBiasse, Thomas Moore, Rhonda Lightle, Janne Koskimäki, Dongdong Zhang, Agnieszka Stadnik, Kristina Piedad, Matthew Hagan, Abdallah Shkoukani, Julián Carrión-Penagos, Dehua Bi, Le Shen, Robert Shenkar, Yuan Ji, Ashley Sidebottom, Eric Pamer, Jack A. Gilbert, Mark L. Kahn, Mark D’Souza, Dinanath Sulakhe, Issam A. Awad, Romuald Girard

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