Identification of highly variable sequence fragments in unmapped reads for rapid bacterial genotyping by Marketa Nykrynova, Vojtech Barton, Matej Bezdicek, Martina Lengerova, Helena Skutkova

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Cryptococcal Pneumonia: An Unusual Complication in a COVID-19 Patient by Jan Štingl, Julie Hylmarová, Martina Lengerová, Jan Maláska, Jan Stašek

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Advanced DNA fingerprint genotyping based on a model developed from real chip electrophoresis data by Helena Skutkova, Martin Vitek, Matej Bezdicek, Eva Brhelova, Martina Lengerova

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Using deep learning for gene detection and classification in raw nanopore signals by Marketa Nykrynova, Roman Jakubicek, Vojtech Barton, Matej Bezdicek, Martina Lengerova, Helena Skutkova

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New Multilocus Sequence Typing Scheme for Enterococcus faecium Based on Whole Genome Sequencing Data by Matej Bezdicek, Jana Hanslikova, Marketa Nykrynova, Kristyna Dufkova, Iva Kocmanova, Petra Kubackova, Jiri Mayer, Martina Lengerova

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Application of mini-MLST and whole genome sequencing in low diversity hospital extended-spectrum beta-lactamase producing Klebsiella pneumoniae population. by Matej Bezdicek, Marketa Nykrynova, Kristina Plevova, Eva Brhelova, Iva Kocmanova, Karel Sedlar, Zdenek Racil, Jiri Mayer, Martina Lengerova

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Rapid Identification of Pseudomonas aeruginosa International High-Risk Clones Based on High-Resolution Melting Analysis by Kristyna Dufkova, Matej Bezdicek, Marketa Nykrynova, Iva Kocmanova, Petra Kubackova, Jana Hanslikova, Karolina Fejkova, Jiri Mayer, Martina Lengerova

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Rapid high-resolution melting genotyping scheme for Escherichia coli based on MLST derived single nucleotide polymorphisms by Matej Bezdicek, Marketa Nykrynova, Karel Sedlar, Stanislava Kralova, Jana Hanslikova, Aja Komprdova, Helena Skutkova, Iva Kocmanova, Jiri Mayer, Martina Lengerova

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Sequencing Independent Molecular Typing of Staphylococcus aureus Isolates: Approach for Infection Control and Clonal Characterization by Kristyna Dufkova, Matej Bezdicek, Kristina Cuprova, Dagmar Pantuckova, Marketa Nykrynova, Eva Brhelova, Iva Kocmanova, Silvie Hodova, Marketa Hanslianova, Tomas Juren, Bretislav Lipovy, Jiri Mayer, Martina Lengerova

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Distribution of SARS-CoV-2 Lineages in the Czech Republic, Analysis of Data from the First Year of the Pandemic by Petr Klempt, Ondřej Brzoň, Martin Kašný, Kateřina Kvapilová, Petr Hubáček, Aleš Briksi, Matěj Bezdíček, Vladimira Koudeláková, Martina Lengerová, Marian Hajdúch, Pavel Dřevínek, Šárka Pospíšilová, Eva Kriegová, Milan Macek, Petr Kvapil

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An Overview of Systematic Reviews of Polymerase Chain Reaction (PCR) for the Diagnosis of Invasive Aspergillosis in Immunocompromised People: A Report of the Fungal PCR Initiative... by Mario Cruciani, P. Lewis White, Rosemary A. Barnes, Juergen Loeffler, J. Peter Donnelly, Thomas R. Rogers, Werner J. Heinz, Adilia Warris, Charles Oliver Morton, Martina Lengerova, Lena Klingspor, Boualem Sendid, Deborah E. A. Lockhart

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COVID-19’s natural course among ambulatory monitored outpatients by Barbora Weinbergerova, Jiri Mayer, Stepan Hrabovsky, Zuzana Novakova, Zdenek Pospisil, Lucie Martykanova, Katerina Hortova, Lucie Mandelova, Karel Hejduk, Renata Chloupková, Michal Pospisil, Martina Doubkova, Vladimir Marek, Renata Novotna, Martin Dolecek, Hana Matejovska Kubesova, Kristian Brat, Radana Parizkova, Petr Husa, Marek Mechl, Zdenek Kral, Martina Lengerova

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Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study by Alexandre Alanio, Maud Gits-Muselli, Nicolas Guigue, Marie Desnos-Ollivier, Enrique J. Calderon, David Di Cave, Damien Dupont, Axel Hamprecht, Philippe M. Hauser, Jannik Helweg-Larsen, Marta Kicia, Katrien Lagrou, Martina Lengerova, Olga Matos, Willem J.G. Melchers, Florent Morio, Gilles Nevez, Anne Totet, Lewis P. White, Stéphane Bretagne

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