Showing 1 - 20 results of 25 for search 'Matthew T. Weirauch', query time: 0.06s Refine Results
  1. 1
    903 Decoding genome-wide association study (GWAS) hits for lupus using massively parallel reporter assays

    903 Decoding genome-wide association study (GWAS) hits for lupus using massively parallel reporter assays by Qiang Wang, Matthew T Weirauch, Peter Nigrovic, Xiaoming Lu

    Published 2022-12-01
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  2. 2
    Degenerate Pax2 and Senseless binding motifs improve detection of low-affinity sites required for enhancer specificity.

    Degenerate Pax2 and Senseless binding motifs improve detection of low-affinity sites required for enhancer specificity. by Arya Zandvakili, Ian Campbell, Lisa M Gutzwiller, Matthew T Weirauch, Brian Gebelein

    Published 2018-04-01
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  3. 3
    NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule

    NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule by Hailu Fu, Haizi Zheng, Xiaoting Chen, Matthew T. Weirauch, Louis J. Muglia, Li Wang, Yaping Liu

    Published 2023-03-01
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  4. 4
    Non-base-contacting residues enable kaleidoscopic evolution of metazoan C2H2 zinc finger DNA binding

    Non-base-contacting residues enable kaleidoscopic evolution of metazoan C2H2 zinc finger DNA binding by Hamed S. Najafabadi, Michael Garton, Matthew T. Weirauch, Sanie Mnaimneh, Ally Yang, Philip M. Kim, Timothy R. Hughes

    Published 2017-09-01
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  5. 5
    Runx1 shapes the chromatin landscape via a cascade of direct and indirect targets.

    Runx1 shapes the chromatin landscape via a cascade of direct and indirect targets. by Matthew R Hass, Daniel Brissette, Sreeja Parameswaran, Mario Pujato, Omer Donmez, Leah C Kottyan, Matthew T Weirauch, Raphael Kopan

    Published 2021-06-01
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  6. 6
    502 The epigenetics of the now known 330 lupus genetic risk loci in two ancestries are independently consonant with causal regulatory mechanisms involving epstein-barr virus (EBV)-encoded transcription co-factors expressed in EBV-infected, EBV latency III-expressing B cells (LCLs)

    502 The epigenetics of the now known 330 lupus genetic risk loci in two ancestries are independently consonant with causal regulatory mechanisms involving epstein-barr virus (EBV)-... by John B Harley, Viktoryia Laurynenka, Sreeja Parameswaran, Xiaoting Chen, Leah C Kottyan, Matthew T Weirauch, Kenneth M Kaufman, Iouri Chepelev

    Published 2024-05-01
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  7. 7
    4277 Functional consequences of the juvenile idiopathic arthritis risk variant at 1q24.3

    4277 Functional consequences of the juvenile idiopathic arthritis risk variant at 1q24.3 by Halima Moncrieffe, Katelyn Dunn, Yongbo Huang, Xiaoting Chen, Carl D. Langefeld, Matthew T. Weirauch, John B. Harley, Leah C. Kottyan, Susan D. Thompson

    Published 2020-06-01
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  8. 8
    Lineage tracing of nuclei in skeletal myofibers uncovers distinct transcripts and interplay between myonuclear populations

    Lineage tracing of nuclei in skeletal myofibers uncovers distinct transcripts and interplay between myonuclear populations by Chengyi Sun, Casey O. Swoboda, Fabian Montecino Morales, Cristofer Calvo, Michael J. Petrany, Sreeja Parameswaran, Andrew VonHandorf, Matthew T. Weirauch, Christoph Lepper, Douglas P. Millay

    Published 2024-10-01
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  9. 9
    CASCADE: high-throughput characterization of regulatory complex binding altered by non-coding variants

    CASCADE: high-throughput characterization of regulatory complex binding altered by non-coding variants by David Bray, Heather Hook, Rose Zhao, Jessica L. Keenan, Ashley Penvose, Yemi Osayame, Nima Mohaghegh, Xiaoting Chen, Sreeja Parameswaran, Leah C. Kottyan, Matthew T. Weirauch, Trevor Siggers

    Published 2022-02-01
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  10. 10
    Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network

    Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network by Shreyasi Mukherjee, Praneet Chaturvedi, Scott A Rankin, Margaret B Fish, Marcin Wlizla, Kitt D Paraiso, Melissa MacDonald, Xiaoting Chen, Matthew T Weirauch, Ira L Blitz, Ken WY Cho, Aaron M Zorn

    Published 2020-09-01
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  11. 11
    Genome-wide epigenetic profiling and transcriptome analysis in pediatric Obstructive Sleep Apnea: A focus on Black female children

    Genome-wide epigenetic profiling and transcriptome analysis in pediatric Obstructive Sleep Apnea: A focus on Black female children by Bala S.C. Koritala, Sreeja Parameswaran, Omer A. Donmez, Carmy Forney, Hope Rowden, Charles A. Moore, Angela L. Duggins, Alexandra Sestito, Brittany A. Leader, Matthew T. Weirauch, Leah C. Kottyan, David F. Smith

    Published 2024-12-01
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  12. 12
    Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities

    Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities by Kamesh Narasimhan, Samuel A Lambert, Ally WH Yang, Jeremy Riddell, Sanie Mnaimneh, Hong Zheng, Mihai Albu, Hamed S Najafabadi, John S Reece-Hoyes, Juan I Fuxman Bass, Albertha JM Walhout, Matthew T Weirauch, Timothy R Hughes

    Published 2015-04-01
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  13. 13
    Myeloid Malignancies with Chromosome 5q Deletions Acquire a Dependency on an Intrachromosomal NF-κB Gene Network

    Myeloid Malignancies with Chromosome 5q Deletions Acquire a Dependency on an Intrachromosomal NF-κB Gene Network by Jing Fang, Brenden Barker, Lyndsey Bolanos, Xiaona Liu, Andres Jerez, Hideki Makishima, Susanne Christie, Xiaoting Chen, Dinesh S. Rao, H. Leighton Grimes, Kakajan Komurov, Matthew T. Weirauch, Jose A. Cancelas, Jaroslaw P. Maciejewski, Daniel T. Starczynowski

    Published 2014-09-01
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  14. 14
    A functional mechanism for a non-coding variant near AGTR2 associated with risk for preterm birth

    A functional mechanism for a non-coding variant near AGTR2 associated with risk for preterm birth by Li Wang, Robert M. Rossi, Xiaoting Chen, Jing Chen, Jilian Runyon, Mehak Chawla, Daniel Miller, Carmy Forney, Arthur Lynch, Xuzhe Zhang, Fansheng Kong, Bo Jacobsson, Leah C. Kottyan, Matthew T. Weirauch, Ge Zhang, Louis J. Muglia

    Published 2023-07-01
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  15. 15
    maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks.

    maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks. by Tareian A Cazares, Faiz W Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T Bejjani, Joseph A Wayman, Omer Donmez, Benjamin Wronowski, Sreeja Parameswaran, Leah C Kottyan, Artem Barski, Matthew T Weirauch, V B Surya Prasath, Emily R Miraldi

    Published 2023-01-01
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  16. 16
    High-throughput identification of functional regulatory SNPs in systemic lupus erythematosus

    High-throughput identification of functional regulatory SNPs in systemic lupus erythematosus by Qiang Wang, Taehyeung Kim, Marta Martínez-Bonet, Vitor R. C. Aguiar, Sangwan Sim, Jing Cui, Jeffrey A. Sparks, Xiaoting Chen, Marc Todd, Brian Wauford, Miranda C. Marion, Carl D. Langefeld, Matthew T. Weirauch, Maria Gutierrez-Arcelus, Peter A. Nigrovic

    Published 2024-08-01
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  17. 17
    Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis.

    Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis. by Amy A Eapen, Sreeja Parameswaran, Carmy Forney, Lee E Edsall, Daniel Miller, Omer Donmez, Katelyn Dunn, Xiaoming Lu, Marissa Granitto, Hope Rowden, Adam Z Magier, Mario Pujato, Xiaoting Chen, Kenneth Kaufman, David I Bernstein, Ashley L Devonshire, Marc E Rothenberg, Matthew T Weirauch, Leah C Kottyan

    Published 2022-05-01
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  18. 18
    Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development

    Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development by Taehyeung Kim, Marta Martínez-Bonet, Qiang Wang, Nicolaj Hackert, Jeffrey A. Sparks, Yuriy Baglaenko, Byunghee Koh, Roxane Darbousset, Raquel Laza-Briviesca, Xiaoting Chen, Vitor R. C. Aguiar, Darren J. Chiu, Harm-Jan Westra, Maria Gutierrez-Arcelus, Matthew T. Weirauch, Soumya Raychaudhuri, Deepak A. Rao, Peter A. Nigrovic

    Published 2024-03-01
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  19. 19
    Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis

    Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis by Katherine Noelani Chang, Shan Zhong, Matthew T Weirauch, Gary Hon, Mattia Pelizzola, Hai Li, Shao-shan Carol Huang, Robert J Schmitz, Mark A Urich, Dwight Kuo, Joseph R Nery, Hong Qiao, Ally Yang, Abdullah Jamali, Huaming Chen, Trey Ideker, Bing Ren, Ziv Bar-Joseph, Timothy R Hughes, Joseph R Ecker

    Published 2013-06-01
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  20. 20
    A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth

    A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth by Chong Wang, Xiang Liu, Jun Liang, Yohei Narita, Weiyue Ding, Difei Li, Luyao Zhang, Hongbo Wang, Merrin Man Long Leong, Isabella Hou, Catherine Gerdt, Chang Jiang, Qian Zhong, Zhonghui Tang, Carmy Forney, Leah Kottyan, Matthew T. Weirauch, Benjamin E. Gewurz, Mu-sheng Zeng, Sizun Jiang, Mingxiang Teng, Bo Zhao

    Published 2023-03-01
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