SequelTools: a suite of tools for working with PacBio Sequel raw sequence data by David E. Hufnagel, Matthew B. Hufford, Arun S. Seetharam

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Response to Commentary: Accounting for diverse transposable element landscapes is key to developing and evaluating accurate de novo annotation strategies by Shujun Ou, Ning Jiang, Candice N. Hirsch, Matthew B. Hufford

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Natural variation in teosinte at the domestication locus teosinte branched1 (tb1) by Laura Vann, Thomas Kono, Tanja Pyhäjärvi, Matthew B. Hufford, Jeffrey Ross-Ibarra

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How the pan-genome is changing crop genomics and improvement by Rafael Della Coletta, Yinjie Qiu, Shujun Ou, Matthew B. Hufford, Candice N. Hirsch

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The genomic signature of crop-wild introgression in maize. by Matthew B Hufford, Pesach Lubinksy, Tanja Pyhäjärvi, Michael T Devengenzo, Norman C Ellstrand, Jeffrey Ross-Ibarra

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Correction: The Genomic Signature of Crop-Wild Introgression in Maize. by Matthew B. Hufford, Pesach Lubinksy, Tanja Pyhäjärvi, Michael T. Devengenzo, Norman C. Ellstrand, Jeffrey Ross-Ibarra

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The potential role of genetic assimilation during maize domestication. by Anne Lorant, Sarah Pedersen, Irene Holst, Matthew B Hufford, Klaus Winter, Dolores Piperno, Jeffrey Ross-Ibarra

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Genomic abundance is not predictive of tandem repeat localization in grass genomes. by Paul Bilinski, Yonghua Han, Matthew B Hufford, Anne Lorant, Pingdong Zhang, Matt C Estep, Jiming Jiang, Jeffrey Ross-Ibarra

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GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations by Nancy Manchanda, John L. Portwood, Margaret R. Woodhouse, Arun S. Seetharam, Carolyn J. Lawrence-Dill, Carson M. Andorf, Matthew B. Hufford

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The Streptochaeta Genome and the Evolution of the Grasses by Arun S. Seetharam, Yunqing Yu, Sébastien Bélanger, Lynn G. Clark, Blake C. Meyers, Blake C. Meyers, Elizabeth A. Kellogg, Matthew B. Hufford

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Characterization of introgression from the teosinte Zea mays ssp. mexicana to Mexican highland maize by Eric Gonzalez-Segovia, Sergio Pérez-Limon, G. Carolina Cíntora-Martínez, Alejandro Guerrero-Zavala, Garrett M. Janzen, Matthew B. Hufford, Jeffrey Ross-Ibarra, Ruairidh J. H. Sawers

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Author Correction: Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline by Shujun Ou, Weijia Su, Yi Liao, Kapeel Chougule, Jireh R. A. Agda, Adam J. Hellinga, Carlos Santiago Blanco Lugo, Tyler A. Elliott, Doreen Ware, Thomas Peterson, Ning Jiang, Candice N. Hirsch, Matthew B. Hufford

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A happy accident: a novel turfgrass reference genome by Alyssa R Phillips, Arun S Seetharam, Patrice S Albert, Taylor AuBuchon-Elder, James A Birchler, Edward S Buckler, Lynn J Gillespie, Matthew B Hufford, Victor Llaca, Maria Cinta Romay, Robert J Soreng, Elizabeth A Kellogg, Jeffrey Ross-Ibarra

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Demonstration of local adaptation in maize landraces by reciprocal transplantation by Garrett M. Janzen, María Rocío Aguilar‐Rangel, Carolina Cíntora‐Martínez, Karla Azucena Blöcher‐Juárez, Eric González‐Segovia, Anthony J. Studer, Daniel E. Runcie, Sherry A. Flint‐Garcia, Rubén Rellán‐Álvarez, Ruairidh J. H. Sawers, Matthew B. Hufford

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Gapless assembly of maize chromosomes using long-read technologies by Jianing Liu, Arun S. Seetharam, Kapeel Chougule, Shujun Ou, Kyle W. Swentowsky, Jonathan I. Gent, Victor Llaca, Margaret R. Woodhouse, Nancy Manchanda, Gernot G. Presting, David A. Kudrna, Magdy Alabady, Candice N. Hirsch, Kevin A. Fengler, Doreen Ware, Todd P. Michael, Matthew B. Hufford, R. Kelly Dawe

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MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication by Jonathan Cahn, Michael Regulski, Jason Lynn, Evan Ernst, Cristiane de Santis Alves, Srividya Ramakrishnan, Kapeel Chougule, Sharon Wei, Zhenyuan Lu, Xiaosa Xu, Umamaheswari Ramu, Jorg Drenkow, Melissa Kramer, Arun Seetharam, Matthew B. Hufford, W. Richard McCombie, Doreen Ware, David Jackson, Michael C. Schatz, Thomas R. Gingeras, Robert A. Martienssen

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Genomic variation within the maize stiff‐stalk heterotic germplasm pool by Nolan Bornowski, Kathryn J. Michel, John P. Hamilton, Shujun Ou, Arun S. Seetharam, Jerry Jenkins, Jane Grimwood, Chris Plott, Shengqiang Shu, Jayson Talag, Megan Kennedy, Hope Hundley, Vasanth R. Singan, Kerrie Barry, Chris Daum, Yuko Yoshinaga, Jeremy Schmutz, Candice N. Hirsch, Matthew B. Hufford, Natalia deLeon, Shawn M. Kaeppler, C. Robin Buell

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Effect of sequence depth and length in long-read assembly of the maize inbred NC358 by Shujun Ou, Jianing Liu, Kapeel M. Chougule, Arkarachai Fungtammasan, Arun S. Seetharam, Joshua C. Stein, Victor Llaca, Nancy Manchanda, Amanda M. Gilbert, Sharon Wei, Chen-Shan Chin, David E. Hufnagel, Sarah Pedersen, Samantha J. Snodgrass, Kevin Fengler, Margaret Woodhouse, Brian P. Walenz, Sergey Koren, Adam M. Phillippy, Brett T. Hannigan, R. Kelly Dawe, Candice N. Hirsch, Matthew B. Hufford, Doreen Ware

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