Characterising genome architectures using genome decomposition analysis by Eerik Aunin, Matthew Berriman, Adam James Reid

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The stage- and sex-specific transcriptome of the human parasite Schistosoma mansoni by Sarah K. Buddenborg, Zhigang Lu, Geetha Sankaranarayan, Stephen R. Doyle, Matthew Berriman

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RNAseq analysis of the parasitic nematode Strongyloides stercoralis reveals divergent regulation of canonical dauer pathways. by Jonathan D Stoltzfus, Samuel Minot, Matthew Berriman, Thomas J Nolan, James B Lok

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Identification of anti-schistosomal, anthelmintic and anti-parasitic compounds curated and text-mined from the scientific literature [version 1; peer review: 2 approved] by Noel M. O'Boyle, Gilda Padalino, Matthew Berriman, Karl F. Hoffmann, Avril Coghlan

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Using ChEMBL to Complement Schistosome Drug Discovery by Gilda Padalino, Avril Coghlan, Giampaolo Pagliuca, Josephine E. Forde-Thomas, Matthew Berriman, Karl F. Hoffmann

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Correction: A manually curated annotation characterises genomic features of P. falciparum lncRNAs by Johanna Hoshizaki, Sophie H. Adjalley, Vandana Thathy, Kim Judge, Matthew Berriman, Adam J. Reid, Marcus C. S. Lee

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A manually curated annotation characterises genomic features of P. falciparum lncRNAs by Johanna Hoshizaki, Sophie H. Adjalley, Vandana Thathy, Kim Judge, Matthew Berriman, Adam J. Reid, Marcus C. S. Lee

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Differences between Trypanosoma brucei gambiense groups 1 and 2 in their resistance to killing by trypanolytic factor 1. by Paul Capewell, Nicola J Veitch, C Michael R Turner, Jayne Raper, Matthew Berriman, Stephen L Hajduk, Annette MacLeod

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Genomic and Proteomic Studies on the Mode of Action of Oxaboroles against the African Trypanosome. by Deuan C Jones, Bernardo J Foth, Michael D Urbaniak, Stephen Patterson, Han B Ong, Matthew Berriman, Alan H Fairlamb

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Expression profiling of Echinococcus multilocularis miRNAs throughout metacestode development in vitro. by Natalia Macchiaroli, Matías Preza, Matías Gastón Pérez, Laura Kamenetzky, Marcela Cucher, Uriel Koziol, Estela Castillo, Matthew Berriman, Klaus Brehm, Mara Cecilia Rosenzvit

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Tissue-specific transcriptome analyses provide new insights into GPCR signalling in adult Schistosoma mansoni. by Steffen Hahnel, Nic Wheeler, Zhigang Lu, Arporn Wangwiwatsin, Paul McVeigh, Aaron Maule, Matthew Berriman, Timothy Day, Paula Ribeiro, Christoph G Grevelding

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Dynamics of host immune response development during Schistosoma mansoni infection by Alice H. Costain, Alice H. Costain, Alexander T. Phythian-Adams, Stefano A. P. Colombo, Angela K. Marley, Christian Owusu, Peter C. Cook, Peter C. Cook, Sheila L. Brown, Lauren M. Webb, Lauren M. Webb, Rachel J. Lundie, Jessica G. Borger, Hermelijn H. Smits, Matthew Berriman, Matthew Berriman, Andrew S. MacDonald

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Corrigendum: Dynamics of host immune response development during Schistosoma mansoni infection by Alice H. Costain, Alice H. Costain, Alexander T. Phythian-Adams, Stefano A. P. Colombo, Angela K. Marley, Christian Owusu, Peter C. Cook, Peter C. Cook, Sheila L. Brown, Lauren M. Webb, Lauren M. Webb, Rachel J. Lundie, Jessica G. Borger, Hermelijn H. Smits, Matthew Berriman, Matthew Berriman, Andrew S. MacDonald

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The genome sequence of the liver fluke Opisthorchis viverrini (Poirier, 1886) Stiles & Hassall, 1896 [version 1; peer review: 2 approved] by Thomas Crellen, Arporn Wangwiwatsin, Matthew Berriman, Chitsakul Phuyao, Siriyakorn Kulwong, Watcharin Loilome, Attapol Titapun, Nisana Namwat, Poramate Klanrit, Stephen R. Doyle, Paiboon Sithithaworn

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Flatworm-specific transcriptional regulators promote the specification of tegumental progenitors in Schistosoma mansoni by George R Wendt, Julie NR Collins, Jimin Pei, Mark S Pearson, Hayley M Bennett, Alex Loukas, Matthew Berriman, Nick V Grishin, James J Collins III

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A single-cell atlas of the miracidium larva of Schistosoma mansoni reveals cell types, developmental pathways, and tissue architecture by Teresa Attenborough, Kate A Rawlinson, Carmen L Diaz Soria, Kirsty Ambridge, Geetha Sankaranarayanan, Jennie Graham, James A Cotton, Stephen R Doyle, Gabriel Rinaldi, Matthew Berriman

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Correction: MiR-277/4989 regulate transcriptional landscape during juvenile to adult transition in the parasitic helminth Schistosoma mansoni. by Anna V Protasio, Stijn van Dongen, Julie Collins, Leonor Quintais, Diogo M Ribeiro, Florian Sessler, Martin Hunt, Gabriel Rinaldi, James J Collins, Anton J Enright, Matthew Berriman

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A transcriptomic analysis of Echinococcus granulosus larval stages: implications for parasite biology and host adaptation. by John Parkinson, James D Wasmuth, Gustavo Salinas, Cristiano V Bizarro, Chris Sanford, Matthew Berriman, Henrique B Ferreira, Arnaldo Zaha, Mark L Blaxter, Rick M Maizels, Cecilia Fernández

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MiR-277/4989 regulate transcriptional landscape during juvenile to adult transition in the parasitic helminth Schistosoma mansoni. by Anna V Protasio, Stijn van Dongen, Julie Collins, Leonor Quintais, Diogo M Ribeiro, Florian Sessler, Martin Hunt, Gabriel Rinaldi, James J Collins, Anton J Enright, Matthew Berriman

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Genome-wide transcriptome analysis of Echinococcus multilocularis larvae and germinative cell cultures reveals genes involved in parasite stem cell function by Michaela Herz, Magdalena Zarowiecki, Leonie Wessels, Katharina Pätzel, Ruth Herrmann, Christiane Braun, Nancy Holroyd, Thomas Huckvale, Monika Bergmann, Markus Spiliotis, Uriel Koziol, Uriel Koziol, Matthew Berriman, Klaus Brehm

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