Multi-time series RNA-seq analysis of Enterobacter lignolyticus SCF1 during growth in lignin-amended medium. by Roberto Orellana, Gina Chaput, Lye Meng Markillie, Hugh Mitchell, Matt Gaffrey, Galya Orr, Kristen M DeAngelis

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Synthetic Soil Aggregates: Bioprinted Habitats for High-Throughput Microbial Metaphenomics by Darian Smercina, Neerja Zambare, Kirsten Hofmockel, Natalie Sadler, Erin L. Bredeweg, Carrie Nicora, Lye Meng Markillie, Jayde Aufrecht

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Distinct strains of Toxoplasma gondii feature divergent transcriptomes regardless of developmental stage. by Matthew McKnight Croken, Yanfen Ma, Lye Meng Markillie, Ronald C Taylor, Galya Orr, Louis M Weiss, Kami Kim

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Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics. by Becky M Hess, Junfeng Xue, Lye Meng Markillie, Ronald C Taylor, H Steven Wiley, Birgitte K Ahring, Bryan Linggi

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A crucial role for dynamic expression of components encoding the negative arm of the circadian clock by Bin Wang, Xiaoying Zhou, Arminja N. Kettenbach, Hugh D. Mitchell, Lye Meng Markillie, Jennifer J. Loros, Jay C. Dunlap

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The Toxoplasma gondii cyst wall protein CST1 is critical for cyst wall integrity and promotes bradyzoite persistence. by Tadakimi Tomita, David J Bzik, Yan Fen Ma, Barbara A Fox, Lye Meng Markillie, Ronald C Taylor, Kami Kim, Louis M Weiss

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Spatial Proteomics toward Subcellular Resolution by Coupling Deep Ultraviolet Laser Ablation with Nanodroplet Sample Preparation by Piliang Xiang, Andrey Liyu, Yumi Kwon, Dehong Hu, Sarah M. Williams, Dušan Veličković, Lye Meng Markillie, William B. Chrisler, Ljiljana Paša-Tolić, Ying Zhu

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Oligosaccharide production and signaling correlate with delayed flowering in an Arabidopsis genotype grown and selected in high [CO2]. by Hannah Kinmonth-Schultz, Stephen Michael Walker, Kerem Bingol, David W Hoyt, Young-Mo Kim, Lye Meng Markillie, Hugh D Mitchell, Carrie D Nicora, Ronald Taylor, Joy K Ward

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Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture by Nymul Khan, Yukari Maezato, Ryan S. McClure, Colin J. Brislawn, Jennifer M. Mobberley, Nancy Isern, William B. Chrisler, Lye Meng Markillie, Brett M. Barney, Hyun-Seob Song, William C. Nelson, Hans C. Bernstein

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Unlocking the Constraints of Cyanobacterial Productivity: Acclimations Enabling Ultrafast Growth by Hans C. Bernstein, Ryan S. McClure, Eric A. Hill, Lye Meng Markillie, William B. Chrisler, Margie F. Romine, Jason E. McDermott, Matthew C. Posewitz, Donald A. Bryant, Allan E. Konopka, James K. Fredrickson, Alexander S. Beliaev

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Re-routing of Sugar Catabolism Provides a Better Insight Into Fungal Flexibility in Using Plant Biomass-Derived Monomers as Substrates by Tania Chroumpi, Mao Peng, Lye Meng Markillie, Hugh D. Mitchell, Carrie D. Nicora, Chelsea M. Hutchinson, Vanessa Paurus, Nikola Tolic, Chaevien S. Clendinen, Galya Orr, Scott E. Baker, Miia R. Mäkelä, Miia R. Mäkelä, Ronald P. de Vries

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High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip by Jongmin Woo, Sarah M. Williams, Lye Meng Markillie, Song Feng, Chai-Feng Tsai, Victor Aguilera-Vazquez, Ryan L. Sontag, Ronald J. Moore, Dehong Hu, Hardeep S. Mehta, Joshua Cantlon-Bruce, Tao Liu, Joshua N. Adkins, Richard D. Smith, Geremy C. Clair, Ljiljana Pasa-Tolic, Ying Zhu

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Author Correction: High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip by Jongmin Woo, Sarah M. Williams, Lye Meng Markillie, Song Feng, Chia-Feng Tsai, Victor Aguilera-Vazquez, Ryan L. Sontag, Ronald J. Moore, Dehong Hu, Hardeep S. Mehta, Joshua Cantlon-Bruce, Tao Liu, Joshua N. Adkins, Richard D. Smith, Geremy C. Clair, Ljiljana Pasa-Tolic, Ying Zhu

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Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism by Christopher Staley, Abigail P. Ferrieri, Malak M. Tfaily, Yaya Cui, Rosalie K. Chu, Ping Wang, Jared B. Shaw, Charles K. Ansong, Heather Brewer, Angela D. Norbeck, Meng Markillie, Fernanda do Amaral, Thalita Tuleski, Tomás Pellizzaro, Beverly Agtuca, Richard Ferrieri, Susannah G. Tringe, Ljiljana Paša-Tolić, Gary Stacey, Michael J. Sadowsky

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