Gastrointestinal microbiomes of broilers and layer hens in alternative production systems by Steven C. Ricke, Michael J. Rothrock, Jr.

Get full text

Applications of Microbiome Analyses in Alternative Poultry Broiler Production Systems by Zhaohao Shi, Michael J. Rothrock Jr., Steven C. Ricke

Get full text

Mapping foodborne pathogen contamination throughout the conventional and alternative poultry supply chains by Chase E. Golden, Michael J. Rothrock, Jr., Abhinav Mishra

Get full text

Multidrug Resistant Acinetobacter Isolates Release Resistance Determinants Through Contact-Dependent Killing and Bacteriophage Lysis by Clay S. Crippen, Michael J. Rothrock Jr., Susan Sanchez, Christine M. Szymanski

Get full text

Predicting foodborne pathogens and probiotics taxa within poultry-related microbiomes using a machine learning approach by Moses B. Ayoola, Nisha Pillai, Bindu Nanduri, Michael J. Rothrock Jr, Mahalingam Ramkumar

Get full text

An ensemble learning approach to identify pastured poultry farm practice variables and soil constituents that promote Salmonella prevalence by Nisha Pillai, Moses B. Ayoola, Bindu Nanduri, Michael J. Rothrock Jr, Mahalingam Ramkumar

Get full text

Relationship of the Poultry Microbiome to Pathogen Colonization, Farm Management, Poultry Production, and Foodborne Illness Risk Assessment by Xinran Xu, Michael J. Rothrock, Jr., Aditya Mishra, Govindaraj Dev Kumar, Abhinav Mishra

Get full text

Using farm management practices to predict Campylobacter prevalence in pastured poultry farms by Xinran Xu, Michael J. Rothrock, Jr., Anand Mohan, Govindaraj Dev Kumar, Abhinav Mishra

Get full text

Communicating the utility of the microbiome and bioinformatics to small flock poultry producers by Steven C. Ricke, Dana K. Dittoe, Ashley A. Tarcin, Michael J. Rothrock Jr.

Get full text

The Successional Changes in the Gut Microbiome of Pasture-Raised Chickens Fed Soy-Containing and Soy-Free Diets by Jeferson M. Lourenco, Michael J. Rothrock Jr., Francis L. Fluharty, Todd R. Callaway

Get full text

AT Homopolymer Strings in <i>Salmonella enterica</i> Subspecies I Contribute to Speciation and Serovar Diversity by Jean Guard, Adam R. Rivers, Justin N. Vaughn, Michael J. Rothrock, Jr., Adelumola Oladeinde, Devendra H. Shah

Get full text

Adapterama II: universal amplicon sequencing on Illumina platforms (TaggiMatrix) by Travis C. Glenn, Todd W. Pierson, Natalia J. Bayona-Vásquez, Troy J. Kieran, Sandra L. Hoffberg, Jesse C. Thomas IV, Daniel E. Lefever, John W. Finger, Bei Gao, Xiaoming Bian, Swarnali Louha, Ramya T. Kolli, Kerin E. Bentley, Julie Rushmore, Kelvin Wong, Timothy I. Shaw, Michael J. Rothrock Jr, Anna M. McKee, Tai L. Guo, Rodney Mauricio, Marirosa Molina, Brian S. Cummings, Lawrence H. Lash, Kun Lu, Gregory S. Gilbert, Stephen P. Hubbell, Brant C. Faircloth

Get full text