Making the most of methylation by Michiel Vermeulen

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Off-the-shelf proximity biotinylation for interaction proteomics by Irene Santos-Barriopedro, Guido van Mierlo, Michiel Vermeulen

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SNX27-driven membrane localisation of OTULIN antagonises linear ubiquitination and NF-κB signalling activation by Ruona Shi, Xue Shi, Dajiang Qin, Shibing Tang, Michiel Vermeulen, Xiaofei Zhang

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Proteome-wide analysis of disease-associated SNPs that show allele-specific transcription factor binding. by Falk Butter, Lucy Davison, Tar Viturawong, Marion Scheibe, Michiel Vermeulen, John A Todd, Matthias Mann

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The translational landscape of ground state pluripotency by Yaser Atlasi, Seyed Mehdi Jafarnejad, Christos G. Gkogkas, Michiel Vermeulen, Nahum Sonenberg, Hendrik G. Stunnenberg

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Global profiling of protein–DNA and protein–nucleosome binding affinities using quantitative mass spectrometry by Matthew M. Makowski, Cathrin Gräwe, Benjamin M. Foster, Nhuong V. Nguyen, Till Bartke, Michiel Vermeulen

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PIWI proteomics identifies Atari and Pasilla as piRNA biogenesis factors in Aedes mosquitoes by Joep Joosten, Ezgi Taşköprü, Pascal W.T.C. Jansen, Bas Pennings, Michiel Vermeulen, Ronald P. Van Rij

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A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein. by Stefanie J J Bartels, Cornelia G Spruijt, Arie B Brinkman, Pascal W T C Jansen, Michiel Vermeulen, Hendrik G Stunnenberg

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Differential regulation of lineage commitment in human and mouse primed pluripotent stem cells by the nucleosome remodelling and deacetylation complex by Ramy Ragheb, Sarah Gharbi, Julie Cramard, Oluwaseun Ogundele, Susan L. Kloet, Thomas Burgold, Michiel Vermeulen, Nicola Reynolds, Brian Hendrich

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A dual role for SAGA-associated factor 29 (SGF29) in ER stress survival by coordination of both histone H3 acetylation and histone H3 lysine-4 trimethylation. by Andrea W Schram, Roy Baas, Pascal W T C Jansen, Anne Riss, Laszlo Tora, Michiel Vermeulen, H Th Marc Timmers

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Miniaturised interaction proteomics on a microfluidic platform with ultra-low input requirements by Cristina Furlan, René A. M. Dirks, Peter C. Thomas, Robert C. Jones, Jing Wang, Mark Lynch, Hendrik Marks, Michiel Vermeulen

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Arbovirus-vector protein interactomics identifies Loquacious as a co-factor for dengue virus replication in Aedes mosquitoes. by Benoit Besson, Oscar M Lezcano, Gijs J Overheul, Kirsten Janssen, Cornelia G Spruijt, Michiel Vermeulen, Jieqiong Qu, Ronald P van Rij

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THRONCAT: metabolic labeling of newly synthesized proteins using a bioorthogonal threonine analog by Bob J. Ignacio, Jelmer Dijkstra, Natalia Mora, Erik F. J. Slot, Margot J. van Weijsten, Erik Storkebaum, Michiel Vermeulen, Kimberly M. Bonger

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Two chromatin remodeling activities cooperate during activation of hormone responsive promoters. by Guillermo Pablo Vicent, Roser Zaurin, A Silvina Nacht, Ang Li, Jofre Font-Mateu, Francois Le Dily, Michiel Vermeulen, Matthias Mann, Miguel Beato

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NuRD-interacting protein ZFP296 regulates genome-wide NuRD localization and differentiation of mouse embryonic stem cells by Susan L. Kloet, Ino D. Karemaker, Lisa van Voorthuijsen, Rik G. H. Lindeboom, Marijke P. Baltissen, Raghu R. Edupuganti, Deepani W. Poramba-Liyanage, Pascal W. T. C. Jansen, Michiel Vermeulen

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Profiling of plasma extracellular vesicles identifies proteins that strongly associate with patient’s global assessment of disease activity in rheumatoid arthritis by Onno J. Arntz, Rogier M. Thurlings, Esmeralda N. Blaney Davidson, Pascal W. T. C. Jansen, Michiel Vermeulen, Marije I. Koenders, Peter M. van der Kraan, Fons A. J. van de Loo

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Androgen receptor signalling confers clonogenic and migratory advantages in urothelial cell carcinoma of the bladder by Maria V. Luna‐Velez, Jelmer J. Dijkstra, Marina A. Heuschkel, Frank P. Smit, Guillaume van de Zande, Dominique Smeets, J. P. Michiel Sedelaar, Michiel Vermeulen, Gerald W. Verhaegh, Jack A. Schalken

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Integrative multi‐omics analysis of intestinal organoid differentiation by Rik GH Lindeboom, Lisa van Voorthuijsen, Koen C Oost, Maria J Rodríguez‐Colman, Maria V Luna‐Velez, Cristina Furlan, Floriane Baraille, Pascal WTC Jansen, Agnès Ribeiro, Boudewijn MT Burgering, Hugo J Snippert, Michiel Vermeulen

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Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells by Jessie A. G. van Buggenum, Jan P. Gerlach, Sabine E. J. Tanis, Mark Hogeweg, Pascal W. T. C. Jansen, Jesse Middelwijk, Ruud van der Steen, Michiel Vermeulen, Hendrik G. Stunnenberg, Cornelis A. Albers, Klaas W. Mulder

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GFI1B and LSD1 repress myeloid traits during megakaryocyte differentiation by Jeron Venhuizen, Maaike G. J. M. van Bergen, Saskia M. Bergevoet, Daan Gilissen, Cornelia G. Spruijt, Laura Wingens, Emile van den Akker, Michiel Vermeulen, Joop H. Jansen, Joost H. A. Martens, Bert A. van der Reijden

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