Identification of novel biomarkers in seasonal allergic rhinitis by combining proteomic, multivariate and pathway analysis. by Hui Wang, Johan Gottfries, Fredrik Barrenäs, Mikael Benson

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Network properties of complex human disease genes identified through genome-wide association studies. by Fredrik Barrenas, Sreenivas Chavali, Petter Holme, Reza Mobini, Mikael Benson

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Translating genomic medicine to the clinic: challenges and opportunities by Huan Zhang, Lars Klareskog, Andreas Matussek, Stefan M. Pfister, Mikael Benson

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Combined multivariate and pathway analyses show that allergen-induced gene expression changes in CD4+ T cells are reversed by glucocorticoids. by Yelin Zhao, Hui Wang, Mika Gustafsson, Antonella Muraro, Sören Bruhn, Mikael Benson

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Multiomics biomarkers were not superior to clinical variables for pan-cancer screening by Martin Smelik, Yelin Zhao, Dina Mansour Aly, AKM Firoj Mahmud, Oleg Sysoev, Xinxiu Li, Mikael Benson

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Meta-Analysis of Expression Profiling Data Indicates Need for Combinatorial Biomarkers in Pediatric Ulcerative Colitis by Xinxiu Li, Eun Jung Lee, Danuta R. Gawel, Sandra Lilja, Samuel Schäfer, Huan Zhang, Mikael Benson

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Combining network modeling and gene expression microarray analysis to explore the dynamics of Th1 and Th2 cell regulation. by Marco Pedicini, Fredrik Barrenäs, Trevor Clancy, Filippo Castiglione, Eivind Hovig, Kartiek Kanduri, Daniele Santoni, Mikael Benson

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An interactive atlas of genomic, proteomic, and metabolomic biomarkers promotes the potential of proteins to predict complex diseases by Martin Smelik, Yelin Zhao, Xinxiu Li, Joseph Loscalzo, Oleg Sysoev, Firoj Mahmud, Dina Mansour Aly, Mikael Benson

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Digital twins as global learning health and disease models for preventive and personalized medicine by Xinxiu Li, Joseph Loscalzo, A. K. M. Firoj Mahmud, Dina Mansour Aly, Andrey Rzhetsky, Marinka Zitnik, Mikael Benson

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Proteogenomic analysis reveals Arp 2/3 complex as a common molecular mechanism in high risk pancreatic cysts and pancreatic cancer by A. K. M. Firoj Mahmud, Dina Gamaleldin Mansour Aly, Yelin Zhao, Mikael Benson, Martin Smelik, Oleg Sysoev, Hui Wang, Xinxiu Li

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Transcript and protein signatures derived from shared molecular interactions across cancers are associated with mortality by Yelin Zhao, Xinxiu Li, Joseph Loscalzo, Martin Smelik, Oleg Sysoev, Yunzhang Wang, A. K. M. Firoj Mahmud, Dina Mansour Aly, Mikael Benson

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An algorithm-based meta-analysis of genome- and proteome-wide data identifies a combination of potential plasma biomarkers for colorectal cancer by Danuta R. Gawel, Eun Jung Lee, Xinxiu Li, Sandra Lilja, Andreas Matussek, Samuel Schäfer, Renate Slind Olsen, Margaretha Stenmarker, Huan Zhang, Mikael Benson

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Characterization of human thymic exosomes. by Gabriel Skogberg, Judith Gudmundsdottir, Sjoerd van der Post, Kerstin Sandström, Sören Bruhn, Mikael Benson, Lucia Mincheva-Nilsson, Vladimir Baranov, Esbjörn Telemo, Olov Ekwall

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DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure. by Colm E Nestor, Fredrik Barrenäs, Hui Wang, Antonio Lentini, Huan Zhang, Sören Bruhn, Rebecka Jörnsten, Michael A Langston, Gary Rogers, Mika Gustafsson, Mikael Benson

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Dysregulation of complement system and CD4+ T cell activation pathways implicated in allergic response. by Alexessander Couto Alves, Sören Bruhn, Adaikalavan Ramasamy, Hui Wang, John W Holloway, Anna-Liisa Hartikainen, Marjo-Riitta Jarvelin, Mikael Benson, David J Balding, Lachlan J M Coin

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Potential Involvement of Type I Interferon Signaling in Immunotherapy in Seasonal Allergic Rhinitis by Lina Mattson, Antonio Lentini, Danuta R. Gawel, Tejaswi V. S. Badam, Mikael Benson, Torbjorn Ledin, Colm E. Nestor, Mika Gustafsson, Jordi Serra-Musach, Janne Bjorkander, Zou Xiang, Huan Zhang

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A dynamic single cell-based framework for digital twins to prioritize disease genes and drug targets by Xinxiu Li, Eun Jung Lee, Sandra Lilja, Joseph Loscalzo, Samuel Schäfer, Martin Smelik, Maria Regina Strobl, Oleg Sysoev, Hui Wang, Huan Zhang, Yelin Zhao, Danuta R. Gawel, Barbara Bohle, Mikael Benson

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Estimating heritability and genetic correlations from large health datasets in the absence of genetic data by Gengjie Jia, Yu Li, Hanxin Zhang, Ishanu Chattopadhyay, Anders Boeck Jensen, David R. Blair, Lea Davis, Peter N. Robinson, Torsten Dahlén, Søren Brunak, Mikael Benson, Gustaf Edgren, Nancy J. Cox, Xin Gao, Andrey Rzhetsky

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CD4+ T-cell DNA methylation changes during pregnancy significantly correlate with disease-associated methylation changes in autoimmune diseases by Tejaswi V. Badam, Sandra Hellberg, Ratnesh B. Mehta, Jeannette Lechner-Scott, Rodney A. Lea, Jorg Tost, Xavier Mariette, Judit Svensson-Arvelund, Colm E. Nestor, Mikael Benson, Göran Berg, Maria C. Jenmalm, Mika Gustafsson, Jan Ernerudh

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scDrugPrio: a framework for the analysis of single-cell transcriptomics to address multiple problems in precision medicine in immune-mediated inflammatory diseases by Samuel Schäfer, Martin Smelik, Oleg Sysoev, Yelin Zhao, Desiré Eklund, Sandra Lilja, Mika Gustafsson, Holger Heyn, Antonio Julia, István A. Kovács, Joseph Loscalzo, Sara Marsal, Huan Zhang, Xinxiu Li, Danuta Gawel, Hui Wang, Mikael Benson

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