Commitment to Aerobic Glycolysis Sustains Immunosuppression of Human Mesenchymal Stem Cells by Yijun Liu, Xuegang Yuan, Nathalie Muñoz, Timothy M. Logan, Teng Ma

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Activity-based protein profiling identifies alternating activation of enzymes involved in the bifidobacterium shunt pathway or mucin degradation in the gut microbiome response to s... by Bryan J. Killinger, Christopher Whidbey, Natalie C. Sadler, Adrian J. DeLeon, Nathalie Munoz, Young-Mo Kim, Aaron T. Wright

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Tuning a high performing multiplexed-CRISPRi Pseudomonas putida strain to further enhance indigoidine production by Jeffrey J. Czajka, Deepanwita Banerjee, Thomas Eng, Javier Menasalvas, Chunsheng Yan, Nathalie Munoz Munoz, Brenton C. Poirier, Young-Mo Kim, Scott E. Baker, Yinjie J. Tang, Aindrila Mukhopadhyay

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Single-cell isotope tracing reveals functional guilds of bacteria associated with the diatom Phaeodactylum tricornutum by Xavier Mayali, Ty J. Samo, Jeff A. Kimbrel, Megan M. Morris, Kristina Rolison, Courtney Swink, Christina Ramon, Young-Mo Kim, Nathalie Munoz-Munoz, Carrie Nicora, Sam Purvine, Mary Lipton, Rhona K. Stuart, Peter K. Weber

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Evaluation of chromosomal insertion loci in the Pseudomonas putida KT2440 genome for predictable biosystems design by Julie E. Chaves, Rosemarie Wilton, Yuqian Gao, Nathalie Munoz Munoz, Meagan C. Burnet, Zachary Schmitz, John Rowan, Leah H. Burdick, Joshua Elmore, Adam Guss, Dan Close, Jon K. Magnuson, Kristin E. Burnum-Johnson, Joshua K. Michener

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Metabolic engineering to improve production of 3-hydroxypropionic acid from corn-stover hydrolysate in Aspergillus species by Ziyu Dai, Kyle R. Pomraning, Shuang Deng, Joonhoon Kim, Kristen B. Campbell, Ana L. Robles, Beth A. Hofstad, Nathalie Munoz, Yuqian Gao, Teresa Lemmon, Marie S. Swita, Jeremy D. Zucker, Young-Mo Kim, Kristin E. Burnum-Johnson, Jon K. Magnuson

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Production of ent-kaurene from lignocellulosic hydrolysate in Rhodosporidium toruloides by Gina M. Geiselman, Xun Zhuang, James Kirby, Mary B. Tran-Gyamfi, Jan-Philip Prahl, Eric R. Sundstrom, Yuqian Gao, Nathalie Munoz Munoz, Carrie D. Nicora, Derek M. Clay, Gabriella Papa, Kristin E. Burnum-Johnson, Jon K. Magnuson, Deepti Tanjore, Jeffrey M. Skerker, John M. Gladden

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Itaconic acid production is regulated by LaeA in Aspergillus pseudoterreus by Kyle R. Pomraning, Ziyu Dai, Nathalie Munoz, Young-Mo Kim, Yuqian Gao, Shuang Deng, Teresa Lemmon, Marie S. Swita, Jeremy D. Zucker, Joonhoon Kim, Stephen J. Mondo, Ellen Panisko, Meagan C. Burnet, Bobbie-Jo M. Webb-Robertson, Beth Hofstad, Scott E. Baker, Kristin E. Burnum-Johnson, Jon K. Magnuson

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Muconic acid production from glucose and xylose in Pseudomonas putida via evolution and metabolic engineering by Chen Ling, George L. Peabody, Davinia Salvachúa, Young-Mo Kim, Colin M. Kneucker, Christopher H. Calvey, Michela A. Monninger, Nathalie Munoz Munoz, Brenton C. Poirier, Kelsey J. Ramirez, Peter C. St. John, Sean P. Woodworth, Jon K. Magnuson, Kristin E. Burnum-Johnson, Adam M. Guss, Christopher W. Johnson, Gregg T. Beckham

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Elucidating regulatory processes of intense physical activity by multi-omics analysis by Ernesto S. Nakayasu, Marina A. Gritsenko, Young-Mo Kim, Jennifer E. Kyle, Kelly G. Stratton, Carrie D. Nicora, Nathalie Munoz, Kathleen M. Navarro, Daniel Claborne, Yuqian Gao, Karl K. Weitz, Vanessa L. Paurus, Kent J. Bloodsworth, Kelsey A. Allen, Lisa M. Bramer, Fernando Montes, Kathleen A. Clark, Grant Tietje, Justin Teeguarden, Kristin E. Burnum-Johnson

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High-Throughput Large-Scale Targeted Proteomics Assays for Quantifying Pathway Proteins in Pseudomonas putida KT2440 by Yuqian Gao, Yuqian Gao, Thomas L. Fillmore, Nathalie Munoz, Nathalie Munoz, Gayle J. Bentley, Gayle J. Bentley, Christopher W. Johnson, Christopher W. Johnson, Joonhoon Kim, Joonhoon Kim, Jamie A. Meadows, Jamie A. Meadows, Jeremy D. Zucker, Jeremy D. Zucker, Meagan C. Burnet, Meagan C. Burnet, Anna K. Lipton, Anna K. Lipton, Aivett Bilbao, Aivett Bilbao, Daniel J. Orton, Young-Mo Kim, Young-Mo Kim, Ronald J. Moore, Errol W. Robinson, Errol W. Robinson, Scott E. Baker, Scott E. Baker, Bobbie-Jo M. Webb-Robertson, Bobbie-Jo M. Webb-Robertson, Adam M. Guss, Adam M. Guss, John M. Gladden, John M. Gladden, Gregg T. Beckham, Gregg T. Beckham, Jon K. Magnuson, Jon K. Magnuson, Kristin E. Burnum-Johnson, Kristin E. Burnum-Johnson

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Integration of Proteomics and Metabolomics Into the Design, Build, Test, Learn Cycle to Improve 3-Hydroxypropionic Acid Production in Aspergillus pseudoterreus by Kyle R. Pomraning, Ziyu Dai, Nathalie Munoz, Young-Mo Kim, Yuqian Gao, Shuang Deng, Joonhoon Kim, Joonhoon Kim, Beth A. Hofstad, Marie S. Swita, Teresa Lemmon, James R. Collett, Ellen A. Panisko, Bobbie-Jo M. Webb-Robertson, Jeremy D. Zucker, Carrie D. Nicora, Henrique De Paoli, Scott E. Baker, Kristin E. Burnum-Johnson, Nathan J. Hillson, Jon K. Magnuson, Jon K. Magnuson

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Further engineering of R. toruloides for the production of terpenes from lignocellulosic biomass by James Kirby, Gina M. Geiselman, Junko Yaegashi, Joonhoon Kim, Xun Zhuang, Mary Bao Tran-Gyamfi, Jan-Philip Prahl, Eric R. Sundstrom, Yuqian Gao, Nathalie Munoz, Kristin E. Burnum-Johnson, Veronica T. Benites, Edward E. K. Baidoo, Anna Fuhrmann, Katharina Seibel, Bobbie-Jo M. Webb-Robertson, Jeremy Zucker, Carrie D. Nicora, Deepti Tanjore, Jon K. Magnuson, Jeffrey M. Skerker, John M. Gladden

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PeakDecoder enables machine learning-based metabolite annotation and accurate profiling in multidimensional mass spectrometry measurements by Aivett Bilbao, Nathalie Munoz, Joonhoon Kim, Daniel J. Orton, Yuqian Gao, Kunal Poorey, Kyle R. Pomraning, Karl Weitz, Meagan Burnet, Carrie D. Nicora, Rosemarie Wilton, Shuang Deng, Ziyu Dai, Ethan Oksen, Aaron Gee, Rick A. Fasani, Anya Tsalenko, Deepti Tanjore, James Gardner, Richard D. Smith, Joshua K. Michener, John M. Gladden, Erin S. Baker, Christopher J. Petzold, Young-Mo Kim, Alex Apffel, Jon K. Magnuson, Kristin E. Burnum-Johnson

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