Antimicrobial Resistance Diversity Suggestive of Distinct Salmonella Typhimurium Sources or Selective Pressures in Food-Production Animals by Kate C. Mellor, Kate C. Mellor, Liljana Petrovska, Nicholas R. Thomson, Nicholas R. Thomson, Kate Harris, Stuart W. J. Reid, Alison E. Mather

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Novel R pipeline for analyzing Biolog Phenotypic MicroArray data. by Minna Vehkala, Mikhail Shubin, Thomas R Connor, Nicholas R Thomson, Jukka Corander

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Network Rewiring: Physiological Consequences of Reciprocally Exchanging the Physical Locations and Growth-Phase-Dependent Expression Patterns of the <italic toggle="yes">Salmonella... by Marina M. Bogue, Aalap Mogre, Michael C. Beckett, Nicholas R. Thomson, Charles J. Dorman

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Genetic Markers in <i>S.</i> Paratyphi C Reveal Primary Adaptation to Pigs by Satheesh Nair, Maria Fookes, Craig Corton, Nicholas R. Thomson, John Wain, Gemma C. Langridge

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Emergence of carbapenemase-producing Enterobacteriaceae in Malawi by Joseph M. Lewis, Rebecca Lester, Madalitso Mphasa, Rachel Banda, Thomas Edwards, Nicholas R. Thomson, Nicholas Feasey

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Molecular characterisation of the Chlamydia pecorum plasmid from porcine, ovine, bovine, and koala strains indicates plasmid-strain co-evolution by Martina Jelocnik, Nathan L. Bachmann, Helena Seth-Smith, Nicholas R. Thomson, Peter Timms, Adam M. Polkinghorne

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Mycoplasma genitalium: whole genome sequence analysis, recombination and population structure by Maria C. Fookes, James Hadfield, Simon Harris, Surendra Parmar, Magnus Unemo, Jørgen S. Jensen, Nicholas R. Thomson

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Horizontally acquired glycosyltransferase operons drive salmonellae lipopolysaccharide diversity. by Mark R Davies, Sarah E Broadbent, Simon R Harris, Nicholas R Thomson, Marjan W van der Woude

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Quantitative Proteomics of the Infectious and Replicative Forms of Chlamydia trachomatis. by Paul J S Skipp, Chris Hughes, Thérèse McKenna, Richard Edwards, James Langridge, Nicholas R Thomson, Ian N Clarke

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Inhibitory Concentrations of Ciprofloxacin Induce an Adaptive Response Promoting the Intracellular Survival of Salmonella enterica Serovar Typhimurium by Sushmita Sridhar, Sally Forrest, Derek Pickard, Claire Cormie, Emily A. Lees, Nicholas R. Thomson, Gordon Dougan, Stephen Baker

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Determining antimicrobial susceptibility in Salmonella enterica serovar Typhimurium through whole genome sequencing: a comparison against multiple phenotypic susceptibility testing... by Nana Mensah, Yue Tang, Shaun Cawthraw, Manal AbuOun, Jackie Fenner, Nicholas R. Thomson, Alison E. Mather, Liljana Petrovska-Holmes

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The Nature and Extent of Plasmid Variation in <i>Chlamydia trachomatis</i> by Charlotte A. Jones, James Hadfield, Nicholas R. Thomson, David W. Cleary, Peter Marsh, Ian N. Clarke, Colette E. O’Neill

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Isolation and Characterisation of Bacteriophage Selective for Key <i>Acinetobacter baumannii</i> Capsule Chemotypes by Rosesathorn Soontarach, Potjanee Srimanote, Mark C. Enright, George Blundell-Hunter, Matthew J. Dorman, Nicholas R. Thomson, Peter W. Taylor, Supayang P. Voravuthikunchai

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Genomic epidemiology of Vibrio cholerae during a mass vaccination campaign of displaced communities in Bangladesh by Alyce Taylor-Brown, Mokibul Hassan Afrad, Ashraful Islam Khan, Florent Lassalle, Md. Taufiqul Islam, Nabid Anjum Tanvir, Nicholas R. Thomson, Firdausi Qadri

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Retrospective application of transposon-directed insertion-site sequencing to investigate niche-specific virulence of Salmonella Typhimurium in cattle by Prerna Vohra, Roy R. Chaudhuri, Matthew Mayho, Christina Vrettou, Cosmin Chintoan-Uta, Nicholas R. Thomson, Jayne C. Hope, John Hopkins, Mark P. Stevens

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Direct Whole-Genome Sequencing of Cutaneous Strains of Haemophilus ducreyi by Michael Marks, Maria Fookes, Josef Wagner, Rosanna Ghinai, Oliver Sokana, Yaw-Adu Sarkodie, Anthony W. Solomon, David C.W. Mabey, Nicholas R. Thomson

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Complement Susceptibility in Relation to Genome Sequence of Recent <named-content content-type="genus-species">Klebsiella pneumoniae</named-content> Isolates from Thai Hospitals by Jessica Loraine, Eva Heinz, Jessica De Sousa Almeida, Oleksandr Milevskyy, Supayang P. Voravuthikunchai, Potjanee Srimanote, Pattarachai Kiratisin, Nicholas R. Thomson, Peter W. Taylor

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Genomic epidemiology of syphilis reveals independent emergence of macrolide resistance across multiple circulating lineages by Mathew A. Beale, Michael Marks, Sharon K. Sahi, Lauren C. Tantalo, Achyuta V. Nori, Patrick French, Sheila A. Lukehart, Christina M. Marra, Nicholas R. Thomson

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Linkage of Whole Genome Sequencing, Epidemiological, and Clinical Data to Understand the Genetic Diversity and Clinical Outcomes of Shigella flexneri among Men Who Have Sex with Me... by Holly D. Mitchell, Nicholas R. Thomson, Claire Jenkins, Timothy J. Dallman, Anaïs Painset, Peter Kirwan, Valerie Delpech, Amy F. W. Mikhail, Nigel Field, Gwenda Hughes

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Novel Subclone of Carbapenem-Resistant Klebsiella pneumoniae Sequence Type 11 with Enhanced Virulence and Transmissibility, China by Kai Zhou, Tingting Xiao, Sophia David, Qin Wang, Yanzi Zhou, Lihua Guo, David Aanensen, Kathryn E. Holt, Nicholas R. Thomson, Hajo Grundmann, Ping Shen, Yonghong Xiao

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