Increasing airline travel may facilitate co-circulation of multiple dengue virus serotypes in Asia. by Huaiyu Tian, Zhe Sun, Nuno Rodrigues Faria, Jing Yang, Bernard Cazelles, Shanqian Huang, Bo Xu, Qiqi Yang, Oliver G Pybus, Bing Xu

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Association between inflammatory cytokines and anti-SARS-CoV-2 antibodies in hospitalized patients with COVID-19 by Xixi Jing, Min Xu, Deye Song, Tingting Yue, Yali Wang, Pan Zhang, Yanjun Zhong, Min Zhang, Tommy Tsan-Yuk Lam, Nuno Rodrigues Faria, Erik De Clercq, Guangdi Li

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SURTO HOSPITALAR DE COVID‐19 NUMA ÁREA ADMINISTRATIVA DO INSTITUTO CENTRAL DO HC‐FMUSP by Thaís Guimarães, Icaro Boszczowski, Ingra Morales, Laína Bubach Carvalho, Suely Luzia dos Santos, Luis Vicente L. Robles, Nuno Rodrigues Faria, Darlan da Silva Candido, Ester Sabino, Silvia Figueiredo Costa

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Antibody seroconversion in asymptomatic and symptomatic patients infected with severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) by Chuanhao Jiang, Yali Wang, Min Hu, Lingjun Wen, Chuan Wen, Yang Wang, Weihong Zhu, Shi Tai, Zhongbiao Jiang, Kui Xiao, Nuno Rodrigues Faria, Erik De Clercq, Junmei Xu, Guangdi Li

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Epidemiological and ecological determinants of Zika virus transmission in an urban setting by José Lourenço, Maricelia Maia de Lima, Nuno Rodrigues Faria, Andrew Walker, Moritz UG Kraemer, Christian Julian Villabona-Arenas, Ben Lambert, Erenilde Marques de Cerqueira, Oliver G Pybus, Luiz CJ Alcantara, Mario Recker

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Air travel is associated with intracontinental spread of dengue virus serotypes 1-3 in Brazil. by Marcio R T Nunes, Gustavo Palacios, Nuno Rodrigues Faria, Edivaldo Costa Sousa, Jamilla A Pantoja, Sueli G Rodrigues, Valéria L Carvalho, Daniele B A Medeiros, Nazir Savji, Guy Baele, Marc A Suchard, Philippe Lemey, Pedro F C Vasconcelos, W Ian Lipkin

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First report of Aedes albopictus infected by Dengue and Zika virus in a rural outbreak in Brazil. by Helder Ricas Rezende, Camila Malta Romano, Ingra Morales Claro, Giovana Santos Caleiro, Ester Cerdeira Sabino, Alvina Clara Felix, Jefferson Bissoli, Sarah Hill, Nuno Rodrigues Faria, Theresa Cristina Cardoso da Silva, Ana Paula Brioschi Santos, Crispim Cerutti Junior, Creuza Rachel Vicente

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Local Transmission of SARS-CoV-2 Lineage B.1.1.7, Brazil, December 2020 by Ingra Morales Claro, Flavia Cristina da Silva Sales, Mariana Severo Ramundo, Darlan S. Candido, Camila A.M. Silva, Jaqueline Goes de Jesus, Erika R. Manuli, Cristina Mendes de Oliveira, Luciano Scarpelli, Gustavo Campana, Oliver G. Pybus, Ester Cerdeira Sabino, Nuno Rodrigues Faria, José Eduardo Levi

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Molecular and genomic investigation of an urban outbreak of dengue virus serotype 2 in Angola, 2017-2019. by Zoraima Neto, Pedro A Martinez, Sarah C Hill, Domingos Jandondo, Julien Thézé, Marinela Mirandela, Renato Santana Aguiar, Joilson Xavier, Cruz Dos Santos Sebastião, Ana Luísa Micolo Cândido, Filipa Vaz, Gisel Reyes Castro, Joana Paula Paixão, Nicholas J Loman, Philippe Lemey, Oliver G Pybus, Jocelyne Vasconcelos, Nuno Rodrigues Faria, Joana de Morais

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SARS-CoV-2 reinfection caused by the P.1 lineage in Araraquara city, Sao Paulo State, Brazil by Camila Malta Romano, Alvina Clara Felix, Anderson Vicente de Paula, Jaqueline Góes de Jesus, Pamela S. Andrade, Darlan Cândido, Franciane M. de Oliveira, Andreia C. Ribeiro, Francini C. da Silva, Marta Inemami, Angela Aparecida Costa, Cibele O. D. Leal, Walter Manso Figueiredo, Claudio Sergio Pannuti, William M. de Souza, Nuno Rodrigues Faria, Ester Cerdeira Sabino

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Phylogeography of Dengue Virus Serotype 4, Brazil, 2010–2011 by Marcio Roberto Teixeira Nunes, Nuno Rodrigues Faria, Helena Baldez Vasconcelos, Daniele Barbosa de Almeida Medeiros, Clayton Pereira Silva de Lima, Valéria Lima Carvalho, Eliana Vieira Pinto da Silva, Jedson Ferreira Cardoso, Edivaldo Costa Sousa, Keley Nascimento Barbosa Nunes, Sueli Guerreiro Rodrigues, Ana Barroso Abecasis, Marc A. Suchard, Philippe Lemey, Pedro Fernando da Costa Vasconcelos

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Clinical markers of post-Chikungunya chronic inflammatory joint disease: A Brazilian cohort. by Carolina Dos Santos Lázari, Mariana Severo Ramundo, Felipe Ten-Caten, Clarisse S Bressan, Ana Maria Bispo de Filippis, Erika Regina Manuli, Isabella de Moraes, Geovana Maria Pereira, Marina Farrel Côrtes, Darlan da Silva Candido, Alexandra L Gerber, Ana Paula Guimarães, Nuno Rodrigues Faria, Helder I Nakaya, Ana Tereza R Vasconcelos, Patrícia Brasil, Gláucia Paranhos-Baccalà, Ester Cerdeira Sabino

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Early Transmission Dynamics, Spread, and Genomic Characterization of SARS-CoV-2 in Panama by Danilo Franco, Claudia Gonzalez, Leyda E. Abrego, Jean-Paul Carrera, Yamilka Diaz, Yaset Caicedo, Ambar Moreno, Oris Chavarria, Jessica Gondola, Marlene Castillo, Elimelec Valdespino, Melissa Gaitán, Jose Martínez-Mandiche, Lizbeth Hayer, Pablo Gonzalez, Carmen Lange, Yadira Molto, Dalis Mojica, Ruben Ramos, Maria Mastelari, Lizbeth Cerezo, Lourdes Moreno, Christl A. Donnelly, Juan Miguel Pascale, Nuno Rodrigues Faria, Sandra Lopez-Verges, Alexander A. Martinez

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Return of the founder Chikungunya virus to its place of introduction into Brazil is revealed by genomic characterization of exanthematic disease cases by Zuinara Pereira Gusmão Maia, Felicidade Mota Pereira, Rodrigo Fabiano do Carmo Said, Vagner Fonseca, Tiago Gräf, Fernanda de Bruycker Nogueira, Vanessa Brandão Nardy, Joilson Xavier, Maricelia Lima Maia, André L. Abreu, Carlos F. Campelo de Albuquerque, Wanderson Kleber Oliveira, Julio Croda, Ana Maria Bispo de Filippis, Rivaldo Venancio Cunha, Jose Lourenço, Tulio de Oliveira, Nuno Rodrigues Faria, Luiz Carlos Junior Alcantara, Marta Giovanetti

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Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing [version 2; peer review: 2 approved] by Ingra M. Claro, Thais M. Coletti, Mariana S. Ramundo, Ian N. Valenca, Camila A. M. da Silva, Flavia C. S. Sales, Darlan S. Candido, Jaqueline G. de Jesus, Erika R. Manuli, Alvina Clara Felix, Anderson de Paula, Mariana C. Pinho, Pamela dos Santos Andrade, Mariene R. Amorim, William M. Souza, Joshua Quick, Esper G. Kallas, José Luiz Proenca-Modena, Nuno Rodrigues Faria, José Eduardo Levi, Nicholas J. Loman, Ester C. Sabino

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Epidemiological and genomic investigation of chikungunya virus in Rio de Janeiro state, Brazil, between 2015 and 2018. by Filipe Romero Rebello Moreira, Mariane Talon de Menezes, Clarisse Salgado-Benvindo, Charles Whittaker, Victoria Cox, Nilani Chandradeva, Hury Hellen Souza de Paula, André Frederico Martins, Raphael Rangel das Chagas, Rodrigo Decembrino Vargas Brasil, Darlan da Silva Cândido, Alice Laschuk Herlinger, Marisa de Oliveira Ribeiro, Monica Barcellos Arruda, Patricia Alvarez, Marcelo Calado de Paula Tôrres, Ilaria Dorigatti, Oliver Brady, Carolina Moreira Voloch, Amilcar Tanuri, Felipe Iani, William Marciel de Souza, Sergian Vianna Cardozo, Nuno Rodrigues Faria, Renato Santana Aguiar

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Importation and early local transmission of COVID-19 in Brazil, 2020 by Jaqueline Goes de Jesus, Claudio Sacchi, Darlan da Silva Candido, Ingra Morales Claro, Flávia Cristina Silva Sales, Erika Regina Manuli, Daniela Bernardes Borges da Silva, Terezinha Maria de Paiva, Margarete Aparecida Benega Pinho, Katia Correa de Oliveira Santos, Sarah Catherine Hill, Renato Santana Aguiar, Filipe Romero, Fabiana Cristina Pereira dos Santos, Claudia Regina Gonçalves, Maria do Carmo Timenetsky, Joshua Quick, Julio Henrique Rosa Croda, Wanderson de Oliveira, Andrew Rambaut, Oliver G. Pybus, Nicholas J. Loman, Ester Cerdeira Sabino, Nuno Rodrigues Faria

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Circulation of chikungunya virus East/Central/South African lineage in Rio de Janeiro, Brazil. by Joilson Xavier, Marta Giovanetti, Vagner Fonseca, Julien Thézé, Tiago Gräf, Allison Fabri, Jaqueline Goes de Jesus, Marcos Cesar Lima de Mendonça, Cintia Damasceno Dos Santos Rodrigues, Maria Angélica Mares-Guia, Carolina Cardoso Dos Santos, Stephane Fraga de Oliveira Tosta, Darlan Candido, Rita Maria Ribeiro Nogueira, André Luiz de Abreu, Wanderson Kleber Oliveira, Carlos F Campelo de Albuquerque, Alexandre Chieppe, Tulio de Oliveira, Patrícia Brasil, Guilherme Calvet, Patrícia Carvalho Sequeira, Nuno Rodrigues Faria, Ana Maria Bispo de Filippis, Luiz Carlos Junior Alcantara

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Genomic detection of a virus lineage replacement event of dengue virus serotype 2 in Brazil, 2019 by Jaqueline Goes de Jesus, Karina Rocha Dutra, Flavia Cristina da Silva Sales, Ingra Morales Claro, Ana Carolina Terzian, Darlan da Silva Candido, Sarah C Hill, Julien Thézé, Celeste Torres, Tatiana Lang D’Agostini, Alvina Clara Felix, Andreia F Negri Reis, Luiz Carlos Junior Alcantara, André L de Abreu, Júlio HR Croda, Wanderson K de Oliveira, Ana Maria Bispo de Filipis, Maria do Carmo Rodrigues dos Santos Camis, Camila Malta Romano, Nick J Loman, Oliver G Pybus, Ester Cerdeira Sabino, Mauricio L Nogueira, Nuno Rodrigues Faria

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Persistence of chikungunya ECSA genotype and local outbreak in an upper medium class neighborhood in Northeast Brazil. by Jaqueline Goes de Jesus, Gabriel da Luz Wallau, Maricelia Lima Maia, Joilson Xavier, Maria Aparecida Oliveira Lima, Vagner Fonseca, Alvaro Salgado de Abreu, Stephane Fraga de Oliveira Tosta, Helineide Ramos do Amaral, Italo Andrade Barbosa Lima, Paloma Viana Silva, Daiana Carlos Dos Santos, Aline Sousa de Oliveira, Siane Campos de Souza, Melissa Barreto Falcão, Erenilde Cerqueira, Laís Ceschini Machado, Mariana Carolina Sobral, Tatiana Maria Teodoro Rezende, Mylena Ribeiro Pereira, Felicidade Mota Pereira, Zuinara Pereira Gusmão Maia, Rafael Freitas de Oliveira França, André Luiz de Abreu, Carlos Frederico Campelo de Albuquerque E Melo, Nuno Rodrigues Faria, Rivaldo Venâncio da Cunha, Marta Giovanetti, Luiz Carlos Junior Alcantara

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