Identification of novel stage-specific key biomarkers gene for early stage, advanced stage, and metastatic oral squamous cell carcinoma using systems biology approach by Jyotsna Choubey, Olaf Wolkenhauer, Tanushree Chatterjee

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The Prognostic and Predictive Role of Xeroderma Pigmentosum Gene Expression in Melanoma by Sarah Fischer, Sarah Fischer, Mohamed Hamed, Steffen Emmert, Olaf Wolkenhauer, Olaf Wolkenhauer, Georg Fuellen, Alexander Thiem

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In silico investigation of molecular networks linking gastrointestinal diseases, malnutrition, and sarcopenia by Matti Hoch, Luise Ehlers, Karen Bannert, Christina Stanke, David Brauer, Vanessa Caton, Georg Lamprecht, Olaf Wolkenhauer, Olaf Wolkenhauer, Olaf Wolkenhauer, Robert Jaster, Markus Wolfien, Markus Wolfien

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A workflow for the creation of regulatory networks integrating miRNAs and lncRNAs associated with exposure to ionizing radiation using open source data and tools by Sherry Freiesleben, Sherry Freiesleben, Marcus Unverricht-Yeboah, Lea Gütebier, Dagmar Waltemath, Dagmar Waltemath, Ralf Kriehuber, Olaf Wolkenhauer, Olaf Wolkenhauer

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Self-Attention-Based Models for the Extraction of Molecular Interactions from Biological Texts by Prashant Srivastava, Saptarshi Bej, Kristina Yordanova, Olaf Wolkenhauer

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Phosphoglycerate mutases function as reverse regulated isoenzymes in Synechococcus elongatus PCC 7942. by Jiri Jablonsky, Martin Hagemann, Doreen Schwarz, Olaf Wolkenhauer

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Detection and Analysis of Critical Dynamic Properties of Oligodendrocyte Differentiation by Svetoslav G. Nikolov, Olaf Wolkenhauer, Momchil Nenov, Julio Vera

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Metabolic function-based normalization improves transcriptome data-driven reduction of genome-scale metabolic models by Mahdi Jalili, Martin Scharm, Olaf Wolkenhauer, Ali Salehzadeh-Yazdi

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Quick tips for creating effective and impactful biological pathways using the Systems Biology Graphical Notation. by Vasundra Touré, Nicolas Le Novère, Dagmar Waltemath, Olaf Wolkenhauer

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Exploring the evolution of biochemical models at the network level by Tom Gebhardt, Vasundra Touré, Dagmar Waltemath, Olaf Wolkenhauer, Martin Scharm

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Parameter identifiability and sensitivity analysis predict targets for enhancement of STAT1 activity in pancreatic cancer and stellate cells. by Katja Rateitschak, Felix Winter, Falko Lange, Robert Jaster, Olaf Wolkenhauer

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Exploring the evolution of biochemical models at the network level. by Tom Gebhardt, Vasundra Touré, Dagmar Waltemath, Olaf Wolkenhauer, Martin Scharm

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Automated annotation of rare-cell types from single-cell RNA-sequencing data through synthetic oversampling by Saptarshi Bej, Anne-Marie Galow, Robert David, Markus Wolfien, Olaf Wolkenhauer

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An integrative network-driven pipeline for systematic identification of lncRNA-associated regulatory network motifs in metastatic melanoma by Nivedita Singh, Martin Eberhardt, Olaf Wolkenhauer, Julio Vera, Shailendra K. Gupta

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Exploring the Metabolic Heterogeneity of Cancers: A Benchmark Study of Context-Specific Models by Mahdi Jalili, Martin Scharm, Olaf Wolkenhauer, Mehdi Damaghi, Ali Salehzadeh-Yazdi

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Accounting for diverse feature-types improves patient stratification on tabular clinical datasets by Saptarshi Bej, Chaithra Umesh, Manjunath Mahendra, Kristian Schultz, Jit Sarkar, Olaf Wolkenhauer

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Identification and epidemiological characterization of Type-2 diabetes sub-population using an unsupervised machine learning approach by Saptarshi Bej, Jit Sarkar, Saikat Biswas, Pabitra Mitra, Partha Chakrabarti, Olaf Wolkenhauer

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Omics Integration Analyses Reveal the Early Evolution of Malignancy in Breast Cancer by Shamim Sarhadi, Ali Salehzadeh-Yazdi, Mehdi Damaghi, Nosratollah Zarghami, Olaf Wolkenhauer, Hedayatollah Hosseini

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Network analyses reveal new insights into the effect of multicomponent Tr14 compared to single-component diclofenac in an acute inflammation model by Matti Hoch, Suchi Smita, Konstantin Cesnulevicius, Myron Schultz, David Lescheid, Olaf Wolkenhauer, Shailendra Gupta

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Network- and enrichment-based inference of phenotypes and targets from large-scale disease maps by Matti Hoch, Suchi Smita, Konstantin Cesnulevicius, David Lescheid, Myron Schultz, Olaf Wolkenhauer, Shailendra Gupta

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