Using bacterial DNA sequencing data to investigate the epidemiology of plasmid-mediated antibiotic resistance by Orlek, A

Factors associated with plasmid antibiotic resistance gene carriage revealed using large-scale multivariable analysis by Orlek, A, Anjum, MF, Mather, AE, Stoesser, N, Walker, AS

Hotspot mutations and ColE1 plasmids contribute to the fitness of Salmonella Heidelberg in poultry litter by Oladeinde, A, Cook, K, Orlek, A, Zock, G, Herrington, K, Cox, N, Plumblee Lawrence, J, Hall, C

Plasmid classification in an era of whole-genome sequencing: application in studies of antibiotic resistance epidemiology by Orlek, A, Stoesser, N, Anjum, M, Doumith, M, Ellington, M, Peto, T, Crook, D, Woodford, N, Walker, A, Phan, H, Sheppard, A

Ordering the mob: Insights into replicon and MOB typing schemes from analysis of a curated dataset of publicly available plasmids by Orlek, A, Phan, H, Sheppard, A, Doumith, M, Ellington, M, Peto, T, Crook, D, Walker, A, Woodford, N, Anjum, M, Stoesser, N

A curated dataset of complete Enterobacteriaceae plasmids compiled from the NCBI nucleotide database by Orlek, A, Phan, H, Sheppard, A, Doumith, M, Ellington, M, Peto, T, Crook, D, Walker, A, Woodford, N, Anjum, M, Stoesser, N

Genomic epidemiology of complex, multi-species, plasmid-borne blaKPC carbapenemase in Enterobacterales in the UK, 2009-2014 by Stoesser, N, Phan, HTT, Seale, A, Aiken, Z, Thomas, S, Smith, M, Wyllie, D, George, R, Sebra, R, Mathers, A, Vaughan, A, Peto, TEA, Ellington, MJ, Hopkins, KL, Crook, DW, Orlek, A, Welfare, W, Cawthorne, J, Lenney, C, Dodgson, A, Walker, AS