Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic by Yebra, G, Hodcroft, E, Ragonnet-Cronin, M, Pillay, D, Brown, A, Pangea_Hiv Consortium, Project, I, Fraser, C

High prevalence fishing communities are not a major sourceof new HIV infections to the inland populations in RakaiDistrict, Uganda: implications for geo-spatially targeted HIVpreve... by Ratmann, O, Grabowski, MK, Hall, M, Golubchik, T, Wymant, C, Kagaayi, J, Kigozi, G, Quinn, T, Wawer, M, Laeyendecker, O, Serwadda, D, Gray, R, Fraser, C, PANGEA-HIV Consortium, Rakai Health Sciences Program

Phylogenetic tools for generalized HIV-1 epidemics: Findings from the PANGEA-HIV Methods Comparison. by Ratmann, O, Hodcroft, E, Pickles, M, Cori, A, Hall, M, Lycett, S, Colijn, C, Dearlove, B, Didelot, X, Frost, S, Hossain, A, Joy, J, Kendall, M, Kühnert, D, Leventhal, G, Liang, R, Plazzotta, G, Poon, A, Rasmussen, D, Stadler, T, Volz, E, Weis, C, Leigh Brown, A, Fraser, C, PANGEA-HIV Consortium

Quantifying the contribution of different aged men and women to onwards transmission of HIV-1 in generalised epidemics in sub-Saharan Africa: A modelling and phylogenetics approach... by Probert, W, Hall, M, Xi, X, Sauter, R, Golubchik, T, Bonsall, D, Abeler-Dorner, L, Pickles, M, Cori, A, Bwalya, J, Floyd, S, Mandla, N, Shanaube, K, Yang, B, Ayles, H, Bock, P, Donnell, D, Grabowski, K, Pillay, D, Rambaut, A, Ratmann, O, Fidler, S, Hayes, R, Fraser, C, ePANGEA-HIV consortium