BiomMiner: An advanced exploratory microbiome analysis and visualization pipeline. by Amirhossein Shamsaddini, Kimia Dadkhah, Patrick M Gillevet

Get full text

In captive rhesus macaques, cervicovaginal inflammation is common but not associated with the stable polymicrobial microbiome. by Gregory Spear, Kristina Rothaeulser, Linda Fritts, Patrick M Gillevet, Christopher J Miller

Get full text

Quorum-sensing dysbiotic shifts in the HIV-infected oral metabiome. by Robert E Brown, Mahmoud A Ghannoum, Pranab K Mukherjee, Patrick M Gillevet, Masoumeh Sikaroodi

Get full text

Temporal Study of the Microbial Diversity of the North Arm of Great Salt Lake, Utah, U.S. by Swati Almeida-Dalmet, Masoumeh Sikaroodi, Patrick M. Gillevet, Carol D. Litchfield, Bonnie K. Baxter

Get full text

Microbial diversity of genital ulcer disease in men enrolled in a randomized trial of male circumcision in Kisumu, Kenya. by Supriya D Mehta, Stefan J Green, Ian Maclean, Hong Hu, Robert C Bailey, Patrick M Gillevet, Greg T Spear

Get full text

Genetic variation of Borreliella burgdorferi in Fairfax County, Virginia, targeting the OspC gene in white-footed mice by Sonya G. Zawada, Sonya G. Zawada, Michael E. von Fricken, Thomas A. Weppelmann, Masoumeh Sikaroodi, Patrick M. Gillevet

Get full text

Lower Neighborhood Socioeconomic Status Associated with Reduced Diversity of the Colonic Microbiota in Healthy Adults. by Gregory E Miller, Phillip A Engen, Patrick M Gillevet, Maliha Shaikh, Masoumeh Sikaroodi, Christopher B Forsyth, Ece Mutlu, Ali Keshavarzian

Get full text

The Effects of Consuming White Button Mushroom <i>Agaricus bisporus</i> on the Brain and Liver Metabolome Using a Targeted Metabolomic Analysis by Gloria I. Solano-Aguilar, Sukla Lakshman, Saebyeol Jang, Richi Gupta, Aleksey Molokin, Steven G. Schroeder, Patrick M. Gillevet, Joseph F. Urban

Get full text

Fecal Microbiota Transplant in Cirrhosis Reduces Gut Microbial Antibiotic Resistance Genes: Analysis of Two Trials by Jasmohan S. Bajaj, Amirhossein Shamsaddini, Andrew Fagan, Richard K. Sterling, Edith Gavis, Alexander Khoruts, Michael Fuchs, Hannah Lee, Masoumeh Sikaroodi, Patrick M. Gillevet

Get full text

Detection of SARS-CoV-2 RNA in wastewater from dormitory buildings in a university campus: comparison with individual testing results by Brandi B. Williams, Aaron Newborn, Ayesha Karamat, Fanella Zamcho, Jennifer L. Salerno, Patrick M. Gillevet, David Farris, Stephen F. Wintermeyer, Benoit Van Aken

Get full text

Alterations in gut virome are associated with cognitive function and minimal hepatic encephalopathy cross-sectionally and longitudinally in cirrhosis by Thananya Jinato, Masoumeh Sikaroodi, Andrew Fagan, Richard K Sterling, Hannah Lee, Puneet Puri, Brian C Davis, Michael Fuchs, Edith Gavis, Patrick M Gillevet, Jasmohan S Bajaj

Get full text

Oral mycobiome analysis of HIV-infected patients: identification of Pichia as an antagonist of opportunistic fungi. by Pranab K Mukherjee, Jyotsna Chandra, Mauricio Retuerto, Masoumeh Sikaroodi, Robert E Brown, Richard Jurevic, Robert A Salata, Michael M Lederman, Patrick M Gillevet, Mahmoud A Ghannoum

Get full text

Berberine alters gut microbial function through modulation of bile acids by Patricia G. Wolf, Saravanan Devendran, Heidi L. Doden, Lindsey K. Ly, Tyler Moore, Hajime Takei, Hiroshi Nittono, Tsuyoshi Murai, Takao Kurosawa, George E. Chlipala, Stefan J. Green, Genta Kakiyama, Purna Kashyap, Vance J. McCracken, H. Rex Gaskins, Patrick M. Gillevet, Jason M. Ridlon

Get full text

Reduced alcohol preference and intake after fecal transplant in patients with alcohol use disorder is transmissible to germ-free mice by Jennifer T. Wolstenholme, Justin M. Saunders, Maren Smith, Jason D. Kang, Phillip B. Hylemon, Javier González-Maeso, Andrew Fagan, Derrick Zhao, Masoumeh Sikaroodi, Jeremy Herzog, Amirhossein Shamsaddini, Marcela Peña-Rodríguez, Lianyong Su, Yun-Ling Tai, Jing Zheng, Po-Cheng Cheng, R. Balfour Sartor, Patrick M. Gillevet, Huiping Zhou, Jasmohan S. Bajaj

Get full text

Gastric acid suppression promotes alcoholic liver disease by inducing overgrowth of intestinal Enterococcus by Cristina Llorente, Peter Jepsen, Tatsuo Inamine, Lirui Wang, Sena Bluemel, Hui J. Wang, Rohit Loomba, Jasmohan S. Bajaj, Mitchell L. Schubert, Masoumeh Sikaroodi, Patrick M. Gillevet, Jun Xu, Tatiana Kisseleva, Samuel B. Ho, Jessica DePew, Xin Du, Henrik T. Sørensen, Hendrik Vilstrup, Karen E. Nelson, David A. Brenner, Derrick E. Fouts, Bernd Schnabl

Get full text