Genomic landscape of extended-spectrum β-lactamase resistance in Escherichia coli from an urban African setting Por Musicha, P, Feasey, N, Cain, A, Kallonen, T, Chaguza, C, Peno, C, Khonga, M, Thompson, S, Gray, K, Mather, A, Heyderman, R, Everett, D, Thomson, N, Msefula, C

Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. Por Musicha, P, Msefula, C, Mather, A, Chaguza, C, Cain, A, Peno, C, Kallonen, T, Khonga, M, Denis, B, Gray, K, Heyderman, R, Thomson, N, Everett, D, Feasey, N

Emergence of double- and triple-gene reassortant G1P[8] rotaviruses possessing a DS-1-Like backbone after rotavirus vaccine introduction in Malawi Por Jere, KC, Chaguza, C, Bar-Zeev, N, Lowe, J, Peno, C, Kumwenda, B, Nakagomi, O, Tate, JE, Parashar, UD, Heyderman, RS, French, N, Cunliffe, NA, Iturriza-Gomara, M

Early signals of vaccine driven perturbation seen in pneumococcal carriage population genomic data Por Chaguza, C, Heinsbroek, E, Gladstone, R, Tafatatha, T, Alaerts, M, Peno, C, Cornick, J, Musicha, P, Bar-Zeev, N, Kamng'Ona, A, Kadioglu, A, McGee, L, Hanage, W, Breiman, R, Heyderman, R, French, N, Everett, D, Bentley, S

Population genetic structure, antibiotic resistance, capsule switching and evolution of invasive pneumococci before conjugate vaccination in Malawi Por Chaguza, C, Cornick, J, Andam, C, Gladstone, R, Alaerts, M, Musicha, P, Peno, C, Bar-Zeev, N, Kamng'ona, A, Kiran, A, Msefula, C, McGee, L, Breiman, R, Kadioglu, A, French, N, Heyderman, R, Hanage, W, Bentley, S, Everett, D