SARS-CoV-2 variants of concern surveillance including Omicron using RT-PCR–based genotyping offers comparable performance to whole genome sequencing by Simone Vanoni, Arnoldas Matulevicius, Besard Avdiu, Giada Scantamburlo, Camilla Ulekleiv, Pius M. Brzoska, Manohar R. Furtado, Jelena D. M. Feenstra, Alain Rico, Manoj Gandhi, Elisabetta Giacobazzi, Elisa Masi, Markus Paulmichl, Charity Nofziger

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Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus. by Elizabeth M Driebe, Jason W Sahl, Chandler Roe, Jolene R Bowers, James M Schupp, John D Gillece, Erin Kelley, Lance B Price, Talima R Pearson, Crystal M Hepp, Pius M Brzoska, Craig A Cummings, Manohar R Furtado, Paal S Andersen, Marc Stegger, David M Engelthaler, Paul S Keim

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Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology. by Alexander Mellmann, Dag Harmsen, Craig A Cummings, Emily B Zentz, Shana R Leopold, Alain Rico, Karola Prior, Rafael Szczepanowski, Yongmei Ji, Wenlan Zhang, Stephen F McLaughlin, John K Henkhaus, Benjamin Leopold, Martina Bielaszewska, Rita Prager, Pius M Brzoska, Richard L Moore, Simone Guenther, Jonathan M Rothberg, Helge Karch

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Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations. by Brian B Tuch, Rebecca R Laborde, Xing Xu, Jian Gu, Christina B Chung, Cinna K Monighetti, Sarah J Stanley, Kerry D Olsen, Jan L Kasperbauer, Eric J Moore, Adam J Broomer, Ruoying Tan, Pius M Brzoska, Matthew W Muller, Asim S Siddiqui, Yan W Asmann, Yongming Sun, Scott Kuersten, Melissa A Barker, Francisco M De La Vega, David I Smith

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