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Transcriptional Profiling of Plasmodium falciparum Parasites from Patients with Severe Malaria Identifies Distinct Low vs. High Parasitemic Clusters by Regev, Aviv, Mesirov, Jill P., Milner, Danny A., Pochet, Nathalie, Krupka, Malkie, Williams, Chris, Seydel, Karl, Taylor, Terrie E., Peer, Yves Van de, Wirth, Dyann, Daily, Johanna P.
Published 2012
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Comparative analysis of RNA sequencing methods for degraded or low-input samples by Adiconis, Xian, Borges-Rivera, Diego, Satija, Rahul, DeLuca, David S., Busby, Michele A., Berlin, Aaron M., Sivachenko, Andrey, Thompson, Dawn Anne, Wysoker, Alec, Fennell, Timothy, Gnirke, Andreas, Pochet, Nathalie, Regev, Aviv, Levin, Joshua Z.
Published 2014
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Comparative analysis of RNA sequencing methods for degraded or low-input samples by Adiconis, Xian, Borges-Rivera, Diego, Satija, Rahul, DeLuca, David S., Busby, Michele A., Berlin, Aaron M., Sivachenko, Andrey, Thompson, Dawn Anne, Wysoker, Alec, Fennell, Timothy, Gnirke, Andreas, Pochet, Nathalie, Regev, Aviv, Levin, Joshua Z.
Published 2014
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Nanowire-Mediated Delivery Enables Functional Interrogation of Primary Immune Cells: Application to the Analysis of Chronic Lymphocytic Leukemia by Shalek, Alex K., Gaublomme, Jellert T., Wang, Lili, Yosef, Nir, Chevrier, Nicolas, Andersen, Mette S., Robinson, Jacob T., Pochet, Nathalie, Neuberg, Donna S., Gertner, Rona S., Amit, Ido, Brown, Jennifer R., Hacohen, Nir, Regev, Aviv, Wu, Catherine J., Park, Hongkun
Published 2013
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Integrative Genomic Analysis Implicates Gain of PIK3CA at 3q26 and MYC at 8q24 in Chronic Lymphocytic Leukemia by Brown, Jennifer R., Hanna, Megan, Tesar, Bethany, Werner, Lillian, Pochet, Nathalie, Asara, John M., Wang, Yaoyu E., dal Cin, Paola, Fernandes, Stacey M., Thompson, Christina, MacConaill, Laura, Wu, Catherine J., Van de Peer, Yves, Correll, Mick, Regev, Aviv, Neuberg, Donna S., Freedman, Arnold S.
Published 2014
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Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace by Qu, Kun, Garamszegi, Sara, Wu, Felix, Thorvaldsdottir, Helga, Liefeld, Ted, Ocana, Marco, Pochet, Nathalie, Robinson, James T, Demchak, Barry, Hull, Tim, Ben-Artzi, Gil, Blankenberg, Daniel, Barber, Galt P, Lee, Brian T, Kuhn, Robert M, Nekrutenko, Anton, Segal, Eran, Ideker, Trey, Reich, Michael, Chang, Howard Y, Mesirov, Jill P, Borges-Rivera, Diego Ramon, Regev, Aviv
Published 2016
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De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity by Haas, Brian J., Papanicolaou, Alexie, Yassour, Moran, Grabherr, Manfred G., Blood, Philip D., Bowden, Joshua, Couger, Matthew Brian, Eccles, David, Li, Bo, Lieber, Matthias, MacManes, Matthew D., Ott, Michael, Orvis, Joshua, Pochet, Nathalie, Strozzi, Francesco, Weeks, Nathan, Westerman, Rick, William, Thomas, Dewey, Colin N., Henschel, Robert, LeDuc, Richard D., Friedman, Nir, Regev, Aviv
Published 2014
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Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing by Kirby, Andrew, Gnirke, Andreas, Jaffe, David B., Baresova, Veronika, Pochet, Nathalie, Blumenstiel, Brendan, Ye, Chun, Aird, Daniel, Stevens, Christine, Robinson, James T., Cabili, Moran N., Gat-Viks, Irit, Kelliher, Edward, Daza, Riza, DeFelice, Matthew, Hulkova, Helena, Sovova, Jana, Vylet'al, Petr, Antignac, Corinne, Guttman, Mitchell, Handsaker, Robert E., Perrin, Danielle, Steelman, Scott, Sigurdsson, Snaevar, Scheinman, Steven J., Sougnez, Carrie, Cibulskis, Kristian, Parkin, Melissa, Green, Todd, Rossin, Elizabeth, Zody, Michael C., Xavier, Ramnik J., Pollak, Martin R., Alper, Seth L., Lindblad-Toh, Kerstin, Gabriel, Stacey B., Hart, P. Suzanne, Regev, Aviv, Nusbaum, Chad, Kmoch, Stanislav, Bleyer, Anthony J., Daly, Mark J., Lander, Eric Steven
Published 2013
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