RCFGL: Rapid Condition adaptive Fused Graphical Lasso and application to modeling brain region co-expression networks by Souvik Seal, Qunhua Li, Elle Butler Basner, Laura M. Saba, Katerina Kechris

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powerTCR: A model-based approach to comparative analysis of the clone size distribution of the T cell receptor repertoire. by Hillary Koch, Dmytro Starenki, Sara J Cooper, Richard M Myers, Qunhua Li

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RCFGL: Rapid Condition adaptive Fused Graphical Lasso and application to modeling brain region co-expression networks. by Souvik Seal, Qunhua Li, Elle Butler Basner, Laura M Saba, Katerina Kechris

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Condition-adaptive fused graphical lasso (CFGL): An adaptive procedure for inferring condition-specific gene co-expression network. by Yafei Lyu, Lingzhou Xue, Feipeng Zhang, Hillary Koch, Laura Saba, Katerina Kechris, Qunhua Li

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OnTAD: hierarchical domain structure reveals the divergence of activity among TADs and boundaries by Lin An, Tao Yang, Jiahao Yang, Johannes Nuebler, Guanjue Xiang, Ross C. Hardison, Qunhua Li, Yu Zhang

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CLIMB: High-dimensional association detection in large scale genomic data by Hillary Koch, Cheryl A. Keller, Guanjue Xiang, Belinda Giardine, Feipeng Zhang, Yicheng Wang, Ross C. Hardison, Qunhua Li

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Transcriptional Profiling of the Small Intestine and the Colon Reveals Modulation of Gut Infection with <i>Citrobacter rodentium</i> According to the Vitamin A Status by Zhi Chai, Yafei Lyu, Qiuyan Chen, Cheng-Hsin Wei, Lindsay M. Snyder, Veronika Weaver, Aswathy Sebastian, István Albert, Qunhua Li, Margherita T. Cantorna, Catharine Ross

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Model-based assessment of replicability for genome-wide association meta-analysis by Daniel McGuire, Yu Jiang, Mengzhen Liu, J. Dylan Weissenkampen, Scott Eckert, Lina Yang, Fang Chen, GWAS and Sequencing Consortium of Alcohol and Nicotine Use (GSCAN), Arthur Berg, Scott Vrieze, Bibo Jiang, Qunhua Li, Dajiang J. Liu

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Measuring the reproducibility and quality of Hi-C data by Galip Gürkan Yardımcı, Hakan Ozadam, Michael E. G. Sauria, Oana Ursu, Koon-Kiu Yan, Tao Yang, Abhijit Chakraborty, Arya Kaul, Bryan R. Lajoie, Fan Song, Ye Zhan, Ferhat Ay, Mark Gerstein, Anshul Kundaje, Qunhua Li, James Taylor, Feng Yue, Job Dekker, William S. Noble

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