Trees and networks before and after Darwin by Ragan Mark A

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Next-generation phylogenomics by Chan Cheong Xin, Ragan Mark A

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Detecting recombination in evolving nucleotide sequences by Ragan Mark A, Beiko Robert G, Chan Cheong

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Automatic, context-specific generation of Gene Ontology slims by Sehgal Muhammad, Davis Melissa J, Ragan Mark A

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Bayesian and maximum likelihood phylogenetic analyses of protein sequence data under relative branch-length differences and model violation by Harlow Timothy J, Mar Jessica C, Ragan Mark A

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The use of concept maps during knowledge elicitation in ontology development processes – the nutrigenomics use case by Taylor Chris, Stevens Robert, Rocca-Serra Philippe, Castro Alexander, Nashar Karim, Ragan Mark A, Sansone Susanna-Assunta

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The mammalian PYHIN gene family: Phylogeny, evolution and expression by Cridland Jasmyn A, Curley Eva Z, Wykes Michelle N, Schroder Kate, Sweet Matthew J, Roberts Tara L, Ragan Mark A, Kassahn Karin S, Stacey Katryn J

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A genomic survey of the fish parasite <it>Spironucleus salmonicida </it>indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evo... by Logsdon John M, Svärd Staffan G, Murphy Colleen A, Dyal Patricia L, Horner David S, Sjögren Åsa M, Andersson Jan O, Ragan Mark A, Hirt Robert P, Roger Andrew J

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