Mining virulence genes using metagenomics. by Pedro Belda-Ferre, Raúl Cabrera-Rubio, Andrés Moya, Alex Mira

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The Fungal Frontier: A Comparative Analysis of Methods Used in the Study of the Human Gut Mycobiome by Chloe E. Huseyin, Chloe E. Huseyin, Chloe E. Huseyin, Raul Cabrera Rubio, Raul Cabrera Rubio, Orla O’Sullivan, Orla O’Sullivan, Paul D. Cotter, Paul D. Cotter, Pauline D. Scanlan

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The Maternal Diet Index and Offspring Microbiota at 1 Month of Life: Insights from the Mediterranean Birth Cohort MAMI by Raúl Cabrera-Rubio, Kaci Pickett-Nairne, Sonia González-Solares, Maria Carmen Collado, Carina Venter

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Maternal-infant antibiotic resistance genes transference: what do we know? by Anna Samarra, Maria Esteban-Torres, Raul Cabrera-Rubio, Manuel Bernabeu, Silvia Arboleya, Miguel Gueimonde, Maria Carmen Collado

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Diversity of the Microbiota of Traditional Izmir Tulum and Izmir Brined Tulum Cheeses and Selection of Potential Probiotics by Ziba Güley, Vincenzo Fallico, Raul Cabrera-Rubio, Daniel O’Sullivan, Mariarosaria Marotta, Vincenzo Pennone, Sandra Smith, Tom Beresford

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Age‐ and duration‐dependent effects of whey protein on high‐fat diet‐induced changes in body weight, lipid metabolism, and gut microbiota in mice by Serena Boscaini, Raul Cabrera‐Rubio, Oleksandr Nychyk, John R. Speakman, John F. Cryan, Paul D. Cotter, Kanishka N. Nilaweera

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Rapid Increase of Oral Bacteria in Nasopharyngeal Microbiota After Antibiotic Treatment in Children With Invasive Pneumococcal Disease by Desiree Henares, Desiree Henares, Muntsa Rocafort, Muntsa Rocafort, Pedro Brotons, Pedro Brotons, Pedro Brotons, Mariona F. de Sevilla, Mariona F. de Sevilla, Alex Mira, Alex Mira, Cristian Launes, Cristian Launes, Cristian Launes, Raul Cabrera-Rubio, Raul Cabrera-Rubio, Carmen Muñoz-Almagro, Carmen Muñoz-Almagro, Carmen Muñoz-Almagro

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Fine-tuning of post-weaning pig microbiome structure and functionality by in-feed zinc oxide and antibiotics use by Juan M. Ortiz Sanjuán, Juan M. Ortiz Sanjuán, Edgar G. Manzanilla, Edgar G. Manzanilla, Raúl Cabrera-Rubio, Raúl Cabrera-Rubio, Fiona Crispie, Fiona Crispie, Paul D. Cotter, Paul D. Cotter, Paul D. Cotter, Juan J. Garrido, Daniel Ekhlas, Daniel Ekhlas, Lorcan O’Neill, Lorcan O’Neill, Héctor Argüello

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Oral Delivery of Nisin in Resistant Starch Based Matrices Alters the Gut Microbiota in Mice by Ronan Gough, Ronan Gough, Raúl Cabrera Rubio, Raúl Cabrera Rubio, Paula M. O'Connor, Paula M. O'Connor, Fiona Crispie, Fiona Crispie, André Brodkorb, Song Miao, Colin Hill, Colin Hill, Reynolds P. Ross, Reynolds P. Ross, Paul D. Cotter, Paul D. Cotter, Kanishka N. Nilaweera, Mary C. Rea, Mary C. Rea

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<i>Lactobacillus salivarius</i> UCC118™ Dampens Inflammation and Promotes Microbiota Recovery to Provide Therapeutic Benefit in a DSS-Induced Colitis Model by Namrata Iyer, Michelle A. Williams, Amy A. O’Callaghan, Elaine Dempsey, Raul Cabrera-Rubio, Mathilde Raverdeau, Fiona Crispie, Paul D. Cotter, Sinéad C. Corr

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Effects of removing in-feed antibiotics and zinc oxide on the taxonomy and functionality of the microbiota in post weaning pigs by Juan M. Ortiz Sanjuán, Héctor Argüello, Raúl Cabrera-Rubio, Fiona Crispie, Paul D. Cotter, Juan J. Garrido, Daniel Ekhlas, Catherine M. Burgess, Edgar G. Manzanilla

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Antimicrobial use and production system shape the fecal, environmental, and slurry resistomes of pig farms by Oscar Mencía-Ares, Raúl Cabrera-Rubio, José Francisco Cobo-Díaz, Avelino Álvarez-Ordóñez, Manuel Gómez-García, Héctor Puente, Paul D. Cotter, Fiona Crispie, Ana Carvajal, Pedro Rubio, Héctor Argüello

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Metagenomic comparison of the faecal and environmental resistome on Irish commercial pig farms with and without zinc oxide and antimicrobial usage by Daniel Ekhlas, José F. Cobo Díaz, Raúl Cabrera-Rubio, Elena Alexa, Juan M. Ortiz Sanjuán, Edgar Garcia Manzanilla, Fiona Crispie, Paul D. Cotter, Finola C. Leonard, Héctor Argüello, Catherine M. Burgess

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Porcine reproductive and respiratory syndrome virus impacts on gut microbiome in a strain virulence‐dependent fashion by Héctor Argüello, Irene Magdalena Rodríguez‐Gómez, Jose María Sánchez‐Carvajal, Francisco José Pallares, Iván Díaz, Raúl Cabrera‐Rubio, Fiona Crispie, Paul D. Cotter, Enric Mateu, Gerard Martín‐Valls, Librado Carrasco, Jaime Gómez‐Laguna

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Short-term consumption of a high-fat diet increases host susceptibility to Listeria monocytogenes infection by Vanessa Las Heras, Adam G. Clooney, Feargal J. Ryan, Raul Cabrera-Rubio, Pat G. Casey, Cara M. Hueston, Jorge Pinheiro, Justine K. Rudkin, Silvia Melgar, Paul D. Cotter, Colin Hill, Cormac G. M. Gahan

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Sex-dependent associations between addiction-related behaviors and the microbiome in outbred rats by Veronica L. Peterson, Jerry B. Richards, Paul J. Meyer, Raul Cabrera-Rubio, Jordan A. Tripi, Christopher P. King, Oksana Polesskaya, Amelie Baud, Apurva S. Chitre, Thomaz F.S. Bastiaanssen, Leah Solberg Woods, Fiona Crispie, Timothy G. Dinan, Paul D. Cotter, Abraham A. Palmer, John F. Cryan

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Dietary-Induced Bacterial Metabolites Reduce Inflammation and Inflammation-Associated Cancer via Vitamin D Pathway by Caitlin O’Mahony, Adam Clooney, Siobhan F. Clarke, Mònica Aguilera, Aisling Gavin, Donjete Simnica, Mary Ahern, Aine Fanning, Maurice Stanley, Raul Cabrera Rubio, Elaine Patterson, Tatiana Marques, Rebecca Wall, Aileen Houston, Amr Mahmoud, Michael W. Bennett, Catherine Stanton, Marcus J. Claesson, Paul D. Cotter, Fergus Shanahan, Susan A. Joyce, Silvia Melgar

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