Knowledge driven decomposition of tumor expression profiles by Wessels Lodewyk FA, van Vliet Martin H, Reinders Marcel JT

A comparison of univariate and multivariate gene selection techniques for classification of cancer datasets by van't Veer Laura J, Reinders Marcel JT, Lai Carmen, Wessels Lodewyk FA

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Delineation of amplification, hybridization and location effects in microarray data yields better-quality normalization by van Someren Eugene P, Mentink Anouk, Hulsman Marc, Dechering Koen J, de Boer Jan, Reinders Marcel JT

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The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies by Reinders Marcel JT, Valk Peter JM, Lowenberg Bob, Staal Frank JT, Verhaak Roel GW, de Ridder Dick

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Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data by Beijnen Jos H, Gast Marie-Christine W, Engwegen Judith YMN, Meuleman Wouter, Reinders Marcel JT, Wessels Lodewyk FA

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Pooling breast cancer datasets has a synergetic effect on classification performance and improves signature stability by van de Vijver Marc J, Horlings Hugo M, Reyal Fabien, van Vliet Martin H, Reinders Marcel JT, Wessels Lodewyk FA

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HAT: Hypergeometric Analysis of Tiling-arrays with application to promoter-GeneChip data by Wouters Bas J, de Ridder Jeroen, Beekman Renee, Taskesen Erdogan, Peeters Justine K, Touw Ivo P, Reinders Marcel JT, Delwel Ruud

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Exploiting combinatorial cultivation conditions to infer transcriptional regulation by Reinders Marcel JT, Pronk Jack T, Daran-Lapujade Pascale, Daran Jean-Marc, de Winde Johannes H, Knijnenburg Theo A, Wessels Lodewyk FA

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Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence by Meuleman, Wouter, Peric-Hupkes, Daan, Kind, Jop, Beaudry, Jean-Bernard, Pagie, Ludo, Kellis, Manolis, Reinders, Marcel, Wessels, Lodewyk, van Steensel, Bas

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SIRAC: Supervised Identification of Regions of Aberration in aCGH datasets by Nederlof Petra M, van Beers Eric H, van de Vijver Marc J, Horlings Hugo M, Lai Carmen, Wessels Lodewyk FA, Reinders Marcel JT

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Machine Learning Electronic Health Record Identification of Patients with Rheumatoid Arthritis: Algorithm Pipeline Development and Validation Study by Maarseveen, Tjardo D, Meinderink, Timo, Reinders, Marcel J T, Knitza, Johannes, Huizinga, Tom W J, Kleyer, Arnd, Simon, David, van den Akker, Erik B, Knevel, Rachel

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