Association of age with mortality and virological and immunological response to antiretroviral therapy in rural South African adults. by Portia C Mutevedzi, Richard J Lessells, Alison J Rodger, Marie-Louise Newell

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Scale-up of a decentralized HIV treatment programme in rural KwaZulu-Natal, South Africa: does rapid expansion affect patient outcomes? by Portia C Mutevedzi, Richard J Lessells, Tom Heller, Till Bärnighausen, Graham S Cooke, Marie-Louise Newell

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Treatment of cryptococcal meningitis in KwaZulu-Natal, South Africa. by Josephine V J Lightowler, Graham S Cooke, Portia Mutevedzi, Richard J Lessells, Marie-Louise Newell, Martin Dedicoat

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Emtricitabine-induced pure red cell aplasia by Nithendra Manickchund, Camille du Plessis, Melanie-Anne A. John, Thandekile C. Manzini, Bernadett I. Gosnell, Richard J. Lessells, Yunus S. Moosa

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High-levels of acquired drug resistance in adult patients failing first-line antiretroviral therapy in a rural HIV treatment programme in KwaZulu-Natal, South Africa. by Justen Manasa, Richard J Lessells, Andrew Skingsley, Kevindra K Naidu, Marie-Louise Newell, Nuala McGrath, Tulio de Oliveira, Southern African Treatment and Resistance Network

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International Spread of MDR TB from Tugela Ferry, South Africa by Graham S. Cooke, R. Kate Beaton, Richard J. Lessells, Laurence John, Simon Ashworth, Onn Min Kon, O. Martin Williams, P. Supply, P. Moodley, Alexander S. Pym

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Evaluation of miniaturized Illumina DNA preparation protocols for SARS-CoV-2 whole genome sequencing. by Sureshnee Pillay, James Emmanuel San, Derek Tshiabuila, Yeshnee Naidoo, Yusasha Pillay, Akhil Maharaj, Ugochukwu J Anyaneji, Eduan Wilkinson, Houriiyah Tegally, Richard J Lessells, Cheryl Baxter, Tulio de Oliveira, Jennifer Giandhari

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Comparison of SARS-CoV-2 sequencing using the ONT GridION and the Illumina MiSeq by Derek Tshiabuila, Jennifer Giandhari, Sureshnee Pillay, Upasana Ramphal, Yajna Ramphal, Arisha Maharaj, Ugochukwu Jacob Anyaneji, Yeshnee Naidoo, Houriiyah Tegally, Emmanuel James San, Eduan Wilkinson, Richard J. Lessells, Tulio de Oliveira

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Evaluation of miniaturized Illumina DNA preparation protocols for SARS-CoV-2 whole genome sequencing by Sureshnee Pillay, James Emmanuel San, Derek Tshiabuila, Yeshnee Naidoo, Yusasha Pillay, Akhil Maharaj, Ugochukwu J. Anyaneji, Eduan Wilkinson, Houriiyah Tegally, Richard J. Lessells, Cheryl Baxter, Tulio de Oliveira, Jennifer Giandhari

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HIV-1 drug resistance in adults and adolescents on protease inhibitor-based antiretroviral therapy in KwaZulu-Natal Province, South Africa by Benjamin Chimukangara, Richard J. Lessells, Benn Sartorius, Lilishia Gounder, Sontaga Manyana, Melendhran Pillay, Lavanya Singh, Jennifer Giandhari, Kerusha Govender, Reshmi Samuel, Nokukhanya Msomi, Kogieleum Naidoo, Tulio de Oliveira, Pravi Moodley, Raveen Parboosing

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SARS-CoV-2 Genetic Diversity and Lineage Dynamics in Egypt during the First 18 Months of the Pandemic by Wael H. Roshdy, Mohamed K. Khalifa, James Emmanuel San, Houriiyah Tegally, Eduan Wilkinson, Shymaa Showky, Darren Patrick Martin, Monika Moir, Amel Naguib, Nancy Elguindy, Mokhtar R. Gomaa, Manal Fahim, Hanaa Abu Elsood, Amira Mohsen, Ramy Galal, Mohamed Hassany, Richard J. Lessells, Ahmed A. Al-Karmalawy, Rabeh EL-Shesheny, Ahmed M. Kandeil, Mohamed A. Ali, Tulio de Oliveira

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HIV status alters disease severity and immune cell responses in Beta variant SARS-CoV-2 infection wave by Farina Karim, Inbal Gazy, Sandile Cele, Yenzekile Zungu, Robert Krause, Mallory Bernstein, Khadija Khan, Yashica Ganga, Hylton Rodel, Ntombifuthi Mthabela, Matilda Mazibuko, Daniel Muema, Dirhona Ramjit, Thumbi Ndung'u, Willem Hanekom, Bernadett Gosnell, COMMIT-KZN Team, Richard J Lessells, Emily B Wong, Tulio de Oliveira, Mahomed-Yunus S Moosa, Gil Lustig, Alasdair Leslie, Henrik Kløverpris, Alex Sigal

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Evolution and neutralization escape of the SARS-CoV-2 BA.2.86 subvariant by Khadija Khan, Gila Lustig, Cornelius Römer, Kajal Reedoy, Zesuliwe Jule, Farina Karim, Yashica Ganga, Mallory Bernstein, Zainab Baig, Laurelle Jackson, Boitshoko Mahlangu, Anele Mnguni, Ayanda Nzimande, Nadine Stock, Dikeledi Kekana, Buhle Ntozini, Cindy van Deventer, Terry Marshall, Nithendra Manickchund, Bernadett I. Gosnell, Richard J. Lessells, Quarraisha Abdool Karim, Salim S. Abdool Karim, Mahomed-Yunus S. Moosa, Tulio de Oliveira, Anne von Gottberg, Nicole Wolter, Richard A. Neher, Alex Sigal

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Rapid dynamic changes of FL.2 variant: A case report of COVID-19 breakthrough infection by Wonderful T. Choga, Gobuiwang Khilly Kurusa (Gasenna), James Emmanuel San, Tidimalo Ookame, Irene Gobe, Mohammed Chand, Badisa Phafane, Kedumetse Seru, Patience Matshosi, Boitumelo Zuze, Nokuthula Ndlovu, Teko Matsuru, Dorcas Maruapula, Ontlametse T. Bareng, Kutlo Macheke, Lesego Kuate-Lere, Labapotswe Tlale, Onalethata Lesetedi, Modiri Tau, Mpaphi B. Mbulawa, Pamela Smith-Lawrence, Mogomotsi Matshaba, Roger Shapiro, Joseph Makhema, Darren P. Martin, Tulio de Oliveira, Richard J. Lessells, Shahin Lockman, Simani Gaseitsiwe, Sikhulile Moyo

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Author Correction: Omicron BA.4/BA.5 escape neutralizing immunity elicited by BA.1 infection by Khadija Khan, Farina Karim, Yashica Ganga, Mallory Bernstein, Zesuliwe Jule, Kajal Reedoy, Sandile Cele, Gila Lustig, Daniel Amoako, Nicole Wolter, Natasha Samsunder, Aida Sivro, James Emmanuel San, Jennifer Giandhari, Houriiyah Tegally, Sureshnee Pillay, Yeshnee Naidoo, Matilda Mazibuko, Yoliswa Miya, Nokuthula Ngcobo, Nithendra Manickchund, Nombulelo Magula, Quarraisha Abdool Karim, Anne von Gottberg, Salim S. Abdool Karim, Willem Hanekom, Bernadett I. Gosnell, COMMIT-KZN Team, Richard J. Lessells, Tulio de Oliveira, Mahomed-Yunus S. Moosa, Alex Sigal

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Clearance of persistent SARS-CoV-2 associates with increased neutralizing antibodies in advanced HIV disease post-ART initiation by Farina Karim, Catherine Riou, Mallory Bernstein, Zesuliwe Jule, Gila Lustig, Strauss van Graan, Roanne S. Keeton, Janine-Lee Upton, Yashica Ganga, Khadija Khan, Kajal Reedoy, Matilda Mazibuko, Katya Govender, Kershnee Thambu, Nokuthula Ngcobo, Elizabeth Venter, Zanele Makhado, Willem Hanekom, Anne von Gottberg, Monjurul Hoque, Quarraisha Abdool Karim, Salim S. Abdool Karim, Nithendra Manickchund, Nombulelo Magula, Bernadett I. Gosnell, Richard J. Lessells, Penny L. Moore, Wendy A. Burgers, Tulio de Oliveira, Mahomed-Yunus S. Moosa, Alex Sigal

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Omicron BA.4/BA.5 escape neutralizing immunity elicited by BA.1 infection by Khadija Khan, Farina Karim, Yashica Ganga, Mallory Bernstein, Zesuliwe Jule, Kajal Reedoy, Sandile Cele, Gila Lustig, Daniel Amoako, Nicole Wolter, Natasha Samsunder, Aida Sivro, James Emmanuel San, Jennifer Giandhari, Houriiyah Tegally, Sureshnee Pillay, Yeshnee Naidoo, Matilda Mazibuko, Yoliswa Miya, Nokuthula Ngcobo, Nithendra Manickchund, Nombulelo Magula, Quarraisha Abdool Karim, Anne von Gottberg, Salim S. Abdool Karim, Willem Hanekom, Bernadett I. Gosnell, COMMIT-KZN Team, Richard J. Lessells, Tulio de Oliveira, Mahomed-Yunus S. Moosa, Alex Sigal

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