Tiling array data analysis: a multiscale approach using wavelets by Rozowsky Joel, Karpikov Alexander, Gerstein Mark

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An approach to compare genome tiling microarray and MPSS sequencing data for transcript mapping by Rozowsky Joel, Agarwal Ashish, Sasidharan Rajkumar, Gerstein Mark

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Mismatch oligonucleotides in human and yeast: guidelines for probe design on tiling microarrays by Jee Justin, Nagalakshmi Ugrappa, Royce Thomas, Rozowsky Joel, Seringhaus Michael, Snyder Michael, Gerstein Mark

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Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing by Yellman Christopher M, Gibson Theodore, Rozowsky Joel, Auerbach Raymond K, Euskirchen Ghia M, Lefrançois Philippe, Gerstein Mark, Snyder Michael

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Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays by Reinke Valerie, Sasidharan Rajkumar, Hillier LaDeana W, Habegger Lukas, Sboner Andrea, Rozowsky Joel, Koppstein David, Agarwal Ashish, Waterston Robert H, Gerstein Mark

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Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci by Altshuler, Robert Charles, Onuchic, Vitor, Lurie, Eugene, Carrero, Ivenise, Pawliczek, Piotr, Patel, Ronak Y., Rozowsky, Joel, Galeev, Timur, Huang, Zhuoyi, Harris, R. Alan, Coarfa, Cristian, Ashmore, Lillian, Bertol, Jessica W., Fakhouri, Walid D., Yu, Fuli, Kellis, Manolis, Gerstein, Mark, Milosavljevic, Aleksandar

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Expanded encyclopaedias of DNA elements in the human and mouse genomes by Moore, Jill E., Purcaro, Michael J., Pratt, Henry E., Epstein, Charles B., Shoresh, Noam, Adrian, Jessika, Kawli, Trupti, Davis, Carrie A., Dobin, Alexander, Kaul, Rajinder, Halow, Jessica, Van Nostrand, Eric L., Freese, Peter Dale, Gorkin, David U., Shen, Yin, He, Yupeng, Mackiewicz, Mark, Pauli-Behn, Florencia, Williams, Brian A., Mortazavi, Ali, Keller, Cheryl A., Zhang, Xiao-Ou, Elhajjajy, Shaimae I., Huey, Jack, Dickel, Diane E., Snetkova, Valentina, Wei, Xintao, Wang, Xiaofeng, Rivera-Mulia, Juan Carlos, Rozowsky, Joel, Zhang, Jing, Chhetri, Surya B., Zhang, Jialing, Victorsen, Alec, White, Kevin P., Visel, Axel, Yeo, Gene W., Burge, Christopher B, Lécuyer, Eric, Gilbert, David M., Dekker, Job, Rinn, John, Mendenhall, Eric M., Ecker, Joseph R., Kellis, Manolis, Klein, Robert J., Noble, William S., Kundaje, Anshul, Guigó, Roderic, Farnham, Peggy J., Cherry, J. Michael, Myers, Richard M., Ren, Bing, Graveley, Brenton R., Gerstein, Mark B., Pennacchio, Len A., Snyder, Michael P., Bernstein, Bradley E., Wold, Barbara, Hardison, Ross C., Gingeras, Thomas R., Stamatoyannopoulos, John A., Weng, Zhiping

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