Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP by Huijing Yu, Zhenxian Zheng, Junhao Su, Tak-Wah Lam, Ruibang Luo

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LRSim: A Linked-Reads Simulator Generating Insights for Better Genome Partitioning by Ruibang Luo, Fritz J. Sedlazeck, Charlotte A. Darby, Stephen M. Kelly, Michael C. Schatz

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Duet: SNP-assisted structural variant calling and phasing using Oxford nanopore sequencing by Yekai Zhou, Amy Wing-Sze Leung, Syed Shakeel Ahmed, Tak-Wah Lam, Ruibang Luo

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MegaGTA: a sensitive and accurate metagenomic gene-targeted assembler using iterative de Bruijn graphs by Dinghua Li, Yukun Huang, Chi-Ming Leung, Ruibang Luo, Hing-Fung Ting, Tak-Wah Lam

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Building a Chinese pan-genome of 486 individuals by Qiuhui Li, Shilin Tian, Bin Yan, Chi Man Liu, Tak-Wah Lam, Ruiqiang Li, Ruibang Luo

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Applications and potentials of nanopore sequencing in the (epi)genome and (epi)transcriptome era by Shangqian Xie, Amy Wing-Sze Leung, Zhenxian Zheng, Dake Zhang, Chuanle Xiao, Ruibang Luo, Ming Luo, Shoudong Zhang

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BALSA: integrated secondary analysis for whole-genome and whole-exome sequencing, accelerated by GPU by Ruibang Luo, Yiu-Lun Wong, Wai-Chun Law, Lap-Kei Lee, Jeanno Cheung, Chi-Man Liu, Tak-Wah Lam

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Transcriptome Analysis of Acute Phase Liver Graft Injury in Liver Transplantation by Nikki P. Lee, Haiyang Wu, Kevin T.P. Ng, Ruibang Luo, Tak-Wah Lam, Chung-Mau Lo, Kwan Man

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MegaPath: sensitive and rapid pathogen detection using metagenomic NGS data by Chi-Ming Leung, Dinghua Li, Yan Xin, Wai-Chun Law, Yifan Zhang, Hing-Fung Ting, Ruibang Luo, Tak-Wah Lam

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Integrated modeling framework reveals co-regulation of transcription factors, miRNAs and lncRNAs on cardiac developmental dynamics by Shumin Li, Bin Yan, Binbin Wu, Junhao Su, Jianliang Lu, Tak-Wah Lam, Kenneth R. Boheler, Ellen Ngar-Yun Poon, Ruibang Luo

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Adverse clinical outcomes and immunosuppressive microenvironment of RHO-GTPase activation pattern in hepatocellular carcinoma by Qi Yang, Zewei Zhuo, Xinqi Qiu, Ruibang Luo, Kehang Guo, Huihuan Wu, Rui Jiang, Jingwei Li, Qizhou Lian, Pengfei Chen, Weihong Sha, Hao Chen

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Identification of Cooperative Gene Regulation Among Transcription Factors, LncRNAs, and MicroRNAs in Diabetic Nephropathy Progression by Ling Chen, Binbin Wu, Shaobin Wang, Yu Xiong, Boya Zhou, Xianyi Cheng, Tao Zhou, Ruibang Luo, Tak-Wah Lam, Bin Yan, Bin Yan, Junhui Chen

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Ultra-low-coverage genome-wide association study—insights into gestational age using 17,844 embryo samples with preimplantation genetic testing by Shumin Li, Bin Yan, Thomas K. T. Li, Jianliang Lu, Yifan Gu, Yueqiu Tan, Fei Gong, Tak-Wah Lam, Pingyuan Xie, Yuexuan Wang, Ge Lin, Ruibang Luo

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Editorial: Exploration of genetic variation, drug response, and interactions between gastrointestinal disorders and other diseases by Shuangshuang Tong, Shuangshuang Tong, Shuangshuang Tong, Yanlin Lyu, Yanlin Lyu, Ruibang Luo, Felix Leung, Felix Leung, Weihong Sha, Weihong Sha, Weihong Sha, Hao Chen, Hao Chen, Hao Chen

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ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell by Amy Wing-Sze Leung, Henry Chi-Ming Leung, Chak-Lim Wong, Zhen-Xian Zheng, Wui-Wang Lui, Ho-Ming Luk, Ivan Fai-Man Lo, Ruibang Luo, Tak-Wah Lam

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First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (Formerly Scedosporium prolificans) by Ruibang Luo, Aleksey Zimin, Rachael Workman, Yunfan Fan, Geo Pertea, Nina Grossman, Maggie P. Wear, Bei Jia, Heather Miller, Arturo Casadevall, Winston Timp, Sean X. Zhang, Steven L. Salzberg

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Detecting structural variations with precise breakpoints using low-depth WGS data from a single oxford nanopore MinION flowcell by Henry C. M. Leung, Huijing Yu, Yifan Zhang, Wing Sze Leung, Ivan F. M. Lo, Ho Ming Luk, Wai-Chun Law, Ka Kui Ma, Chak Lim Wong, Yat Sing Wong, Ruibang Luo, Tak-Wah Lam

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Streptococcus oriscaviae sp. nov. Infection Associated with Guinea Pigs by Jade L. L. Teng, Yuanchao Ma, Jonathan H. K. Chen, Ruibang Luo, Chuen-Hing Foo, Tsz Tuen Li, Jordan Y. H. Fong, Weiming Yao, Samson S. Y. Wong, Kitty S. C. Fung, Susanna K. P. Lau, Patrick C. Y. Woo

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From Peer-Reviewed to Peer-Reproduced in Scholarly Publishing: The Complementary Roles of Data Models and Workflows in Bioinformatics. by Alejandra González-Beltrán, Peter Li, Jun Zhao, Maria Susana Avila-Garcia, Marco Roos, Mark Thompson, Eelke van der Horst, Rajaram Kaliyaperumal, Ruibang Luo, Tin-Lap Lee, Tak-Wah Lam, Scott C Edmunds, Susanna-Assunta Sansone, Philippe Rocca-Serra

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Correction: SOAP3-dp: Fast, Accurate and Sensitive GPU-Based Short Read Aligner. by Ruibang Luo, Thomas Wong, Jianqiao Zhu, Chi-Man Liu, Xiaoqian Zhu, Edward Wu, Lap-Kei Lee, Haoxiang Lin, Wenjuan Zhu, David W. Cheung, Hing-Fung Ting, Siu-Ming Yiu, Shaoliang Peng, Chang Yu, Yingrui Li, Ruiqiang Li, Tak-Wah Lam

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