Deep Sequencing Analysis Reveals Distinctive Non-Coding RNAs When Comparing Tumor Multidrug-Resistant Cells and Extracellular Vesicles with Drug-Sensitive Counterparts by Diana Sousa, Rune Matthiesen, Raquel T. Lima, M. Helena Vasconcelos

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Protein-Protein Interactions: Gene Acronym Redundancies and Current Limitations Precluding Automated Data Integration by Juan Casado-Vela, Rune Matthiesen, Susana Sellés, José Ramón Naranjo

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Recent Developments in Clinical Plasma Proteomics—Applied to Cardiovascular Research by Nicolai Bjødstrup Palstrøm, Rune Matthiesen, Lars Melholt Rasmussen, Hans Christian Beck

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Gains, losses and changes of function after gene duplication: study of the metallothionein family. by Ana Moleirinho, João Carneiro, Rune Matthiesen, Raquel M Silva, António Amorim, Luísa Azevedo

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Integrative genomic signatures of hepatocellular carcinoma derived from nonalcoholic Fatty liver disease. by Itziar Frades, Erik Andreasson, Jose Maria Mato, Erik Alexandersson, Rune Matthiesen, Maria Luz Martínez-Chantar

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Assessment of a Large-Scale Unbiased Malignant Pleural Effusion Proteomics Study of a Real-Life Cohort by Sara Zahedi, Ana Sofia Carvalho, Mostafa Ejtehadifar, Hans C. Beck, Nádia Rei, Ana Luis, Paula Borralho, António Bugalho, Rune Matthiesen

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Meta-Analysis of MS-Based Proteomics Studies Indicates Interferon Regulatory Factor 4 and Nucleobindin1 as Potential Prognostic and Drug Resistance Biomarkers in Diffuse Large B Ce... by Mostafa Ejtehadifar, Sara Zahedi, Paula Gameiro, José Cabeçadas, Maria Gomes da Silva, Hans C. Beck, Ana Sofia Carvalho, Rune Matthiesen

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Folding Status Is Determinant over Traffic-Competence in Defining CFTR Interactors in the Endoplasmic Reticulum by João D. Santos, Sara Canato, Ana S. Carvalho, Hugo M. Botelho, Kerman Aloria, Margarida D. Amaral, Rune Matthiesen, Andre O. Falcao, Carlos M. Farinha

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Classification of Amyloidosis by Model-Assisted Mass Spectrometry-Based Proteomics by Nicolai Bjødstrup Palstrøm, Aleksandra M. Rojek, Hanne E. H. Møller, Charlotte Toftmann Hansen, Rune Matthiesen, Lars Melholt Rasmussen, Niels Abildgaard, Hans Christian Beck

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Extracellular Vesicle Proteome in Prostate Cancer: A Comparative Analysis of Mass Spectrometry Studies by Rui Miguel Marques Bernardino, Ricardo Leão, Rui Henrique, Luis Campos Pinheiro, Prashant Kumar, Prashanth Suravajhala, Hans Christian Beck, Ana Sofia Carvalho, Rune Matthiesen

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Extra-cellular vesicles carry proteome of cancer hallmarks by Ana Sofia Carvalho, Henrique Baeta, Bruno Costa Silva, Maria Carolina Strano Moraes, Cristian Bodo, Hans Christian Beck, Manuel S. Rodriguez, Mayank Saraswat, Akhilesh Pandey, Rune Matthiesen

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Extracellular Vesicles in Diffuse Large B Cell Lymphoma: Characterization and Diagnostic Potential by Rune Matthiesen, Paula Gameiro, Andreia Henriques, Cristian Bodo, Maria Carolina Strano Moraes, Bruno Costa-Silva, José Cabeçadas, Maria Gomes da Silva, Hans Christian Beck, Ana Sofia Carvalho

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SPRY4 as a Potential Mediator of the Anti-Tumoral Role of Macrophages in Anaplastic Thyroid Cancer Cells by Ana Teresa Pinto, Marta Pojo, Ricardo Rodrigues, Diana Pacheco Sousa, Rune Matthiesen, Ana Sofia Carvalho, Hans C. Beck, Carolina Pires, Rodrigo Eduardo, Joana Simões Pereira, Valeriano Leite, Branca Maria Cavaco

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Proteomic Profiling of Plasma- and Gut-Derived Extracellular Vesicles in Obesity by Pedro Baptista Pereira, Estefania Torrejón, Inês Ferreira, Ana Sofia Carvalho, Akiko Teshima, Inês Sousa-Lima, Hans Christian Beck, Bruno Costa-Silva, Rune Matthiesen, Maria Paula Macedo, Rita Machado de Oliveira

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IgG⁺ Extracellular Vesicles Measure Therapeutic Response in Advanced Pancreatic Cancer by Nuno Couto, Julia Elzanowska, Joana Maia, Silvia Batista, Catarina Esteves Pereira, Hans Christian Beck, Ana Sofia Carvalho, Maria Carolina Strano Moraes, Carlos Carvalho, Manuela Oliveira, Rune Matthiesen, Bruno Costa-Silva

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Evening and morning alterations in Obstructive Sleep Apnea red blood cell proteome by Amélia Feliciano, Fátima Vaz, Cristina Valentim-Coelho, Vukosava M. Torres, Rita Silva, Vesna Prosinecki, Bruno M. Alexandre, Andreia Almeida, Catarina Almeida-Marques, Ana S. Carvalho, Rune Matthiesen, Atul Malhotra, Paula Pinto, Cristina Bárbara, Deborah Penque

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Proteomic Landscape of Extracellular Vesicles for Diffuse Large B-Cell Lymphoma Subtyping by Ana Sofia Carvalho, Henrique Baeta, Andreia F. A. Henriques, Mostafa Ejtehadifar, Erin M. Tranfield, Ana Laura Sousa, Ana Farinho, Bruno Costa Silva, José Cabeçadas, Paula Gameiro, Maria Gomes da Silva, Hans Christian Beck, Rune Matthiesen

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Transcriptome Reprogramming of CD11b+ Bone Marrow Cells by Pancreatic Cancer Extracellular Vesicles by Joana Maia, Joana Maia, Andreia Hanada Otake, Andreia Hanada Otake, Juliana Poças, Juliana Poças, Juliana Poças, Ana Sofia Carvalho, Hans Christian Beck, Ana Magalhães, Ana Magalhães, Rune Matthiesen, Maria Carolina Strano Moraes, Bruno Costa-Silva

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New roles for AP-1/JUNB in cell cycle control and tumorigenic cell invasion via regulation of cyclin E1 and TGF-β2 by Beatriz Pérez-Benavente, Alihamze Fathinajafabadi, Lorena de la Fuente, Carolina Gandía, Arantxa Martínez-Férriz, José Miguel Pardo-Sánchez, Lara Milián, Ana Conesa, Octavio A. Romero, Julián Carretero, Rune Matthiesen, Isabelle Jariel-Encontre, Marc Piechaczyk, Rosa Farràs

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Proteomics to Identify New Blood Biomarkers for Diagnosing Patients With Acute Stroke by João Pedro Marto, Ana Sofia Carvalho, Inês G. Mollet, Marcelo Mendonça, Manuel Salavisa, Bruna Meira, Marco Fernandes, Filipa Serrazina, Gonçalo Cabral, Rita Ventura, André Sobral‐Pinho, Hans C. Beck, Helena L. A. Vieira, Miguel Viana‐Baptista, Rune Matthiesen

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