Clustering co-abundant genes identifies components of the gut microbiome that are reproducibly associated with colorectal cancer and inflammatory bowel disease by Samuel S. Minot, Amy D. Willis

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In silico benchmarking of metagenomic tools for coding sequence detection reveals the limits of sensitivity and precision by Jonathan Louis Golob, Samuel Schwartz Minot

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Evolutionary and functional implications of hypervariable loci within the skin virome by Geoffrey D. Hannigan, Qi Zheng, Jacquelyn S. Meisel, Samuel S. Minot, Frederick D. Bushman, Elizabeth A. Grice

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MaLiAmPi enables generalizable and taxonomy-independent microbiome features from technically diverse 16S-based microbiome studies by Samuel S. Minot, Bailey Garb, Alennie Roldan, Alice S. Tang, Tomiko T. Oskotsky, Christopher Rosenthal, Noah G. Hoffman, Marina Sirota, Jonathan L. Golob

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Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome by Elliot M. Lee, Sujatha Srinivasan, Samuel O. Purvine, Tina L. Fiedler, Owen P. Leiser, Sean C. Proll, Samuel S. Minot, Brooke L. Deatherage Kaiser, David N. Fredricks

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Correction to: Comprehensive benchmarking and ensemble approaches for metagenomic classifiers by Alexa B. R. McIntyre, Rachid Ounit, Ebrahim Afshinnekoo, Robert J. Prill, Elizabeth Hénaff, Noah Alexander, Samuel S. Minot, David Danko, Jonathan Foox, Sofia Ahsanuddin, Scott Tighe, Nur A. Hasan, Poorani Subramanian, Kelly Moffat, Shawn Levy, Stefano Lonardi, Nick Greenfield, Rita R. Colwell, Gail L. Rosen, Christopher E. Mason

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Comprehensive benchmarking and ensemble approaches for metagenomic classifiers by Alexa B. R. McIntyre, Rachid Ounit, Ebrahim Afshinnekoo, Robert J. Prill, Elizabeth Hénaff, Noah Alexander, Samuel S. Minot, David Danko, Jonathan Foox, Sofia Ahsanuddin, Scott Tighe, Nur A. Hasan, Poorani Subramanian, Kelly Moffat, Shawn Levy, Stefano Lonardi, Nick Greenfield, Rita R. Colwell, Gail L. Rosen, Christopher E. Mason

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Human Tumor-Infiltrating MAIT Cells Display Hallmarks of Bacterial Antigen Recognition in Colorectal Cancer by Shamin Li, Yannick Simoni, Etienne Becht, Chiew Yee Loh, Naisi Li, Daniel Lachance, Si-Lin Koo, Teck Por Lim, Emile Kwong Wei Tan, Ronnie Mathew, Andrew Nguyen, Justin Golovato, Julia D. Berkson, Martin Prlic, Bernett Lee, Samuel S. Minot, Niranjan Nagarajan, Neelendu Dey, Daniel S.W. Tan, Iain B. Tan, Evan W. Newell

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