Showing 1 - 20 results of 29 for search 'Sandeep Chakraborty', query time: 0.06s Refine Results
  1. 1
    A fragmented alignment method detects a putative phosphorylation site and a putative BRC repeat in the Drosophila melanogaster BRCA2 protein [v2; ref status: indexed, http://f1000r.es/1wc]

    A fragmented alignment method detects a putative phosphorylation site and a putative BRC repeat in the Drosophila melanogaster BRCA2 protein [v2; ref status: indexed, http://f1000r... by Sandeep Chakraborty

    Published 2013-10-01
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  2. 2
    An automated flow for directed evolution based on detection of promiscuous scaffolds using spatial and electrostatic properties of catalytic residues.

    An automated flow for directed evolution based on detection of promiscuous scaffolds using spatial and electrostatic properties of catalytic residues. by Sandeep Chakraborty

    Published 2012-01-01
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  3. 3
    MEPPitope: spatial, electrostatic and secondary structure perturbations in the post-fusion Dengue virus envelope protein highlights known epitopes and conserved residues in the Zika virus [version 1; referees: 3 approved]

    MEPPitope: spatial, electrostatic and secondary structure perturbations in the post-fusion Dengue virus envelope protein highlights known epitopes and conserved residues in the Zik... by Sandeep Chakraborty

    Published 2016-06-01
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  4. 4
    A fragmented alignment method detects a phosphorylation site and a new BRC repeat in the Drosophila melanogaster BRCA2 protein, and a new HAT repeat in Utp6 from yeast [v1; ref status: indexed, http://f1000r.es/1aq]

    A fragmented alignment method detects a phosphorylation site and a new BRC repeat in the Drosophila melanogaster BRCA2 protein, and a new HAT repeat in Utp6 from yeast [v1; ref sta... by Sandeep Chakraborty

    Published 2013-06-01
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  5. 5
    Enumerating pathways of proton abstraction based on a spatial and electrostatic analysis of residues in the catalytic site.

    Enumerating pathways of proton abstraction based on a spatial and electrostatic analysis of residues in the catalytic site. by Sandeep Chakraborty

    Published 2012-01-01
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  6. 6
    Computational analysis of perturbations in the post-fusion Dengue virus envelope protein highlights known epitopes and conserved residues in the Zika virus [version 2; referees: 3 approved]

    Computational analysis of perturbations in the post-fusion Dengue virus envelope protein highlights known epitopes and conserved residues in the Zika virus [version 2; referees: 3... by Sandeep Chakraborty

    Published 2016-09-01
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  7. 7
    A quantitative measure of electrostatic perturbation in holo and apo enzymes induced by structural changes.

    A quantitative measure of electrostatic perturbation in holo and apo enzymes induced by structural changes. by Sandeep Chakraborty

    Published 2013-01-01
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  8. 8
    A measure of the promiscuity of proteins and characteristics of residues in the vicinity of the catalytic site that regulate promiscuity.

    A measure of the promiscuity of proteins and characteristics of residues in the vicinity of the catalytic site that regulate promiscuity. by Sandeep Chakraborty, Basuthkar J Rao

    Published 2012-01-01
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  9. 9
    PAGAL - Properties and corresponding graphics of alpha helical structures in proteins [v2; ref status: indexed, http://f1000r.es/4e7]

    PAGAL - Properties and corresponding graphics of alpha helical structures in proteins [v2; ref status: indexed, http://f1000r.es/4e7] by Sandeep Chakraborty, Basuthkar Rao, Abhaya Dandekar

    Published 2014-09-01
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  10. 10
    A measure of the broad substrate specificity of enzymes based on 'duplicate' catalytic residues.

    A measure of the broad substrate specificity of enzymes based on 'duplicate' catalytic residues. by Sandeep Chakraborty, Bjarni Ásgeirsson, Basuthkar J Rao

    Published 2012-01-01
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  11. 11
    PAGAL - Properties and corresponding graphics of alpha helical structures in proteins [v3; ref status: indexed, http://f1000r.es/524]

    PAGAL - Properties and corresponding graphics of alpha helical structures in proteins [v3; ref status: indexed, http://f1000r.es/524] by Sandeep Chakraborty, Basuthkar J. Rao, Abhaya Dandekar

    Published 2015-02-01
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  12. 12
    Characterizing alpha helical properties of Ebola viral proteins as potential targets for inhibition of alpha-helix mediated protein-protein interactions [v3; ref status: indexed, http://f1000r.es/50u]

    Characterizing alpha helical properties of Ebola viral proteins as potential targets for inhibition of alpha-helix mediated protein-protein interactions [v3; ref status: indexed, h... by Sandeep Chakraborty, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya Dandekar

    Published 2015-01-01
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  13. 13
    Directed evolution induces tributyrin hydrolysis in a virulence factor of Xylella fastidiosa using a duplicated gene as a template [v1; ref status: indexed, http://f1000r.es/48i]

    Directed evolution induces tributyrin hydrolysis in a virulence factor of Xylella fastidiosa using a duplicated gene as a template [v1; ref status: indexed, http://f1000r.es/48i] by Hossein Gouran, Sandeep Chakraborty, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya Dandekar

    Published 2014-09-01
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  14. 14
    Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [v3; ref status: indexed, http://f1000r.es/2kg]

    Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [v3; ref status: indexed, http://f1000r.es/2kg] by Sandeep Chakraborty, Ravindra Venkatramani, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya M. Dandekar

    Published 2013-12-01
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  15. 15
    The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment [v3; ref status: indexed, http://f1000r.es/4dq]

    The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment [v3; ref status: indexed, http://f1000r.es/4dq] by Sandeep Chakraborty, Ravindra Venkatramani, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya M. Dandekar

    Published 2014-09-01
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  16. 16
    Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [v1; ref status: indexed, http://f1000r.es/1tg]

    Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [v1; ref status: indexed, http://f1000r.es/1tg] by Sandeep Chakraborty, Ravindra Venkatramani, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya M. Dandekar

    Published 2013-10-01
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  17. 17
    Active site detection by spatial conformity and electrostatic analysis--unravelling a proteolytic function in shrimp alkaline phosphatase.

    Active site detection by spatial conformity and electrostatic analysis--unravelling a proteolytic function in shrimp alkaline phosphatase. by Sandeep Chakraborty, Renu Minda, Lipika Salaye, Swapan K Bhattacharjee, Basuthkar J Rao

    Published 2011-01-01
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  18. 18
    The interaction affinity between vascular cell adhesion molecule-1 (VCAM-1) and very late antigen-4 (VLA-4) analyzed by quantitative FRET.

    The interaction affinity between vascular cell adhesion molecule-1 (VCAM-1) and very late antigen-4 (VLA-4) analyzed by quantitative FRET. by Sandeep Chakraborty, Shih-Yang Hu, Shu-Han Wu, Artashes Karmenyan, Arthur Chiou

    Published 2015-01-01
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  19. 19
    Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [v2; ref status: indexed, http://f1000r.es/2d2]

    Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms [v2; ref status: indexed, http://f1000r.es/2d2] by Sandeep Chakraborty, Ravindra Venkatramani, Basuthkar J. Rao, Bjarni Asgeirsson, Abhaya M. Dandekar

    Published 2013-11-01
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  20. 20
    Sequence/structural analysis of xylem proteome emphasizes pathogenesis-related proteins, chitinases and β-1, 3-glucanases as key players in grapevine defense against Xylella fastidiosa

    Sequence/structural analysis of xylem proteome emphasizes pathogenesis-related proteins, chitinases and β-1, 3-glucanases as key players in grapevine defense against Xylella fastid... by Sandeep Chakraborty, Rafael Nascimento, Paulo A. Zaini, Hossein Gouran, Basuthkar J. Rao, Luiz R. Goulart, Abhaya M. Dandekar

    Published 2016-05-01
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