Genomic analysis of methicillin-resistant Staphylococcus aureus clonal complex 239 isolated from Danish patients with and without an international travel history by Jasmine Coppens, Basil Britto Xavier, Jelle Vlaeminck, Jesper Larsen, Christine Lammens, Sandra Van Puyvelde, Sandra Van Puyvelde, Herman Goossens, Anders Rhod Larsen, Surbhi Malhotra-Kumar

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Convergence of virulence and antimicrobial resistance in increasingly prevalent Escherichia coli ST131 papGII+ sublineages by Michael Biggel, Pieter Moons, Minh Ngoc Nguyen, Herman Goossens, Sandra Van Puyvelde

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Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes reveal differentially expressed proteins linked to the cell surface and pathogenicity. by Sara Saleh, Sandra Van Puyvelde, An Staes, Evy Timmerman, Barbara Barbé, Jan Jacobs, Kris Gevaert, Stijn Deborggraeve

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High relatedness of invasive multi-drug resistant non-typhoidal Salmonella genotypes among patients and asymptomatic carriers in endemic informal settlements in Kenya. by Samuel Kariuki, Cecilia Mbae, Sandra Van Puyvelde, Robert Onsare, Susan Kavai, Celestine Wairimu, Ronald Ngetich, John Clemens, Gordon Dougan

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Horizontally acquired papGII-containing pathogenicity islands underlie the emergence of invasive uropathogenic Escherichia coli lineages by Michael Biggel, Basil B. Xavier, James R. Johnson, Karen L. Nielsen, Niels Frimodt-Møller, Veerle Matheeussen, Herman Goossens, Pieter Moons, Sandra Van Puyvelde

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Correction: Diagnosis of Bacterial Bloodstream Infections: A 16S Metagenomics Approach. by Saskia Decuypere, Conor J Meehan, Sandra Van Puyvelde, Tessa De Block, Jessica Maltha, Lompo Palpouguini, Marc Tahita, Halidou Tinto, Jan Jacobs, Stijn Deborggraeve

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Diagnosis of Bacterial Bloodstream Infections: A 16S Metagenomics Approach. by Saskia Decuypere, Conor J Meehan, Sandra Van Puyvelde, Tessa De Block, Jessica Maltha, Lompo Palpouguini, Marc Tahita, Halidou Tinto, Jan Jacobs, Stijn Deborggraeve

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Factors associated with occurrence of salmonellosis among children living in Mukuru slum, an urban informal settlement in Kenya by Cecilia Mbae, Moses Mwangi, Naomi Gitau, Tabitha Irungu, Fidelis Muendo, Zilla Wakio, Ruth Wambui, Susan Kavai, Robert Onsare, Celestine Wairimu, Ronald Ngetich, Frida Njeru, Sandra Van Puyvelde, John Clemens, Gordon Dougan, Samuel Kariuki

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Supporting evidence for a human reservoir of invasive non-Typhoidal Salmonella from household samples in Burkina Faso. by Annelies S Post, Seydou Nakanabo Diallo, Issa Guiraud, Palpouguini Lompo, Marc Christian Tahita, Jessica Maltha, Sandra Van Puyvelde, Wesley Mattheus, Benedikt Ley, Kamala Thriemer, Eli Rouamba, Karim Derra, Stijn Deborggraeve, Halidou Tinto, Jan Jacobs

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Salmonella Typhi whole genome sequencing in Rwanda shows a diverse historical population with recent introduction of haplotype H58. by Jean Pierre Rutanga, Tessa de Block, Wim L Cuypers, Josephine Cafmeyer, Marjan Peeters, Esperance Umumararungu, Jean Claude S Ngabonziza, Aniceth Rucogoza, Olivier Vandenberg, Delphine Martiny, Angélique Dusabe, Théoneste Nkubana, Gordon Dougan, Claude Mambo Muvunyi, Ivan Emil Mwikarago, Jan Jacobs, Stijn Deborggraeve, Sandra Van Puyvelde

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Genetic and Structural Variation in the O-Antigen of Salmonella enterica Serovar Typhimurium Isolates Causing Bloodstream Infections in the Democratic Republic of the Congo by Sandra Van Puyvelde, Gianmarco Gasperini, Michael Biggel, Marie-France Phoba, Maria Michelina Raso, Tessa de Block, Leen N. Vanheer, Stijn Deborggraeve, Olivier Vandenberg, Nicholas Thomson, Neil Ravenscroft, Calman A. Maclennan, Barbara Bellich, Paola Cescutti, Gordon Dougan, Jan Jacobs, Octavie Lunguya, Francesca Micoli

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Selection of Potential Therapeutic Bacteriophages that Lyse a CTX-M-15 Extended Spectrum β-Lactamase Producing Salmonella enterica Serovar Typhi Strain from the Democratic Republic... by Elene Kakabadze, Khatuna Makalatia, Nino Grdzelishvili, Nata Bakuradze, Marina Goderdzishvili, Ia Kusradze, Marie-France Phoba, Octavie Lunguya, Cédric Lood, Rob Lavigne, Jan Jacobs, Stijn Deborggraeve, Tessa De Block, Sandra Van Puyvelde, David Lee, Aidan Coffey, Anahit Sedrakyan, Patrick Soentjens, Daniel De Vos, Jean-Paul Pirnay, Nina Chanishvili

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A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia by Wim L. Cuypers, Pieter Meysman, François-Xavier Weill, Rene S. Hendriksen, Getenet Beyene, John Wain, Satheesh Nair, Marie A. Chattaway, Blanca M. Perez-Sepulveda, Pieter-Jan Ceyssens, Tessa de Block, Winnie W. Y. Lee, Maria Pardos de la Gandara, Christian Kornschober, Jacob Moran-Gilad, Kees T. Veldman, Martin Cormican, Mia Torpdahl, Patricia I. Fields, Tomáš Černý, Liselotte Hardy, Bieke Tack, Kate C. Mellor, Nicholas Thomson, Gordon Dougan, Stijn Deborggraeve, Jan Jacobs, Kris Laukens, Sandra Van Puyvelde

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A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa by Sandra Van Puyvelde, Tessa de Block, Sushmita Sridhar, Matt Bawn, Robert A. Kingsley, Brecht Ingelbeen, Mathew A. Beale, Barbara Barbé, Hyon Jin Jeon, Lisette Mbuyi-Kalonji, Marie-France Phoba, Dadi Falay, Delphine Martiny, Olivier Vandenberg, Dissou Affolabi, Jean Pierre Rutanga, Pieter-Jan Ceyssens, Wesley Mattheus, Wim L. Cuypers, Marianne A. B. van der Sande, Se Eun Park, Simon Kariuki, Kephas Otieno, John P. A. Lusingu, Joyce R. Mbwana, Samuel Adjei, Anima Sarfo, Seth O. Agyei, Kwaku P. Asante, Walter Otieno, Lucas Otieno, Marc C. Tahita, Palpouguini Lompo, Irving F. Hoffman, Tisungane Mvalo, Chisomo Msefula, Fatimah Hassan-Hanga, Stephen Obaro, Grant Mackenzie, Stijn Deborggraeve, Nicholas Feasey, Florian Marks, Calman A. MacLennan, Nicholas R. Thomson, Jan Jacobs, Gordon Dougan, Samuel Kariuki, Octavie Lunguya

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The genomic epidemiology of multi-drug resistant invasive non-typhoidal Salmonella in selected sub-Saharan African countries by Gordon Dougan, Stephen Baker, Gi Deok Pak, Robert F Breiman, Justin Im, Ellis Owusu-Dabo, Jin Kyung Park, Se Eun Park, Mekonnen Teferi, Raphaël Rakotozandrindrainy, Florian Marks, Ursula Panzner, Mohammad Ali, Leonard Cosmas, Anna Jaeger, Abraham Aseffa, Barry Fields, Morten Bjerregaard-Andersen, John A Crump, Julian T Hertz, Jürgen May, Adama Tall, Yaw Adu-Sarkodie, Duy Thanh Pham, Ligia Maria Cruz Espinoza, Vera von Kalckreuth, Ondari D. Mogeni, Heidi Schütt-Gerowitt, Abdramane Bassiahi Soura, Nagla Gasmelseed, Arvinda Sooka, Karen H Keddy, Holly M Biggs, Joel M Montgomery, Beatrice Olack, Nimako Sarpong, Tsiriniaina Jean Luco Razafindrabe, Tiana Mirana Raminosoa, Leon Parfait Kabore, Emmanuel Sampo, Biruk Yeshitela, Muna Ahmed El Tayeb, Ralf Krumkamp, Denise Myriam Dekker, Amy Gassama, Aissatou Niang, Sandra Valborg Løfberg, Jessica Fung Deerin, Frank Konings, Megan E Carey, Sandra Van Puyvelde, John Clemens

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Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes by Megan E Carey, Zoe A Dyson, Danielle J Ingle, Afreenish Amir, Mabel K Aworh, Marie Anne Chattaway, Ka Lip Chew, John A Crump, Nicholas A Feasey, Benjamin P Howden, Karen H Keddy, Mailis Maes, Christopher M Parry, Sandra Van Puyvelde, Hattie E Webb, Ayorinde Oluwatobiloba Afolayan, Anna P Alexander, Shalini Anandan, Jason R Andrews, Philip M Ashton, Buddha Basnyat, Ashish Bavdekar, Isaac I Bogoch, John D Clemens, Kesia Esther da Silva, Anuradha De, Joep de Ligt, Paula Lucia Diaz Guevara, Christiane Dolecek, Shanta Dutta, Marthie M Ehlers, Louise Francois Watkins, Denise O Garrett, Gauri Godbole, Melita A Gordon, Andrew R Greenhill, Chelsey Griffin, Madhu Gupta, Rene S Hendriksen, Robert S Heyderman, Yogesh Hooda, Juan Carlos Hormazabal, Odion O Ikhimiukor, Junaid Iqbal, Jobin John Jacob, Claire Jenkins, Dasaratha Ramaiah Jinka, Jacob John, Gagandeep Kang, Abdoulie Kanteh, Arti Kapil, Abhilasha Karkey, Samuel Kariuki, Robert A Kingsley, Roshine Mary Koshy, AC Lauer, Myron M Levine, Ravikumar Kadahalli Lingegowda, Stephen P Luby, Grant Austin Mackenzie, Tapfumanei Mashe, Chisomo Msefula, Ankur Mutreja, Geetha Nagaraj, Savitha Nagaraj, Satheesh Nair, Take K Naseri, Susana Nimarota-Brown, Elisabeth Njamkepo, Iruka N Okeke, Sulochana Putli Bai Perumal, Andrew J Pollard, Agila Kumari Pragasam, Firdausi Qadri, Farah N Qamar, Sadia Isfat Ara Rahman, Savitra Devi Rambocus, David A Rasko, Pallab Ray, Roy Robins-Browne, Temsunaro Rongsen-Chandola, Jean Pierre Rutanga, Samir K Saha, Senjuti Saha, Karnika Saigal, Mohammad Saiful Islam Sajib, Jessica C Seidman, Jivan Shakya, Varun Shamanna, Jayanthi Shastri, Rajeev Shrestha, Sonia Sia, Michael J Sikorski, Ashita Singh, Anthony M Smith, Kaitlin A Tagg, Dipesh Tamrakar, Arif Mohammed Tanmoy, Maria Thomas, Mathew S Thomas, Robert Thomsen, Nicholas R Thomson, Siaosi Tupua, Krista Vaidya, Mary Valcanis, Balaji Veeraraghavan, François-Xavier Weill, Jackie Wright, Gordon Dougan, Silvia Argimón, Jacqueline A Keane, David M Aanensen, Stephen Baker, Kathryn E Holt, Global Typhoid Genomics Consortium Group Authorship

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