The Shared Use of Extended Phenotypes Increases the Fitness of Simulated Populations by Guilherme F. de Araújo, Renan C. Moioli, Sandro J. de Souza, Sandro J. de Souza, Sandro J. de Souza

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Exome Sequencing of Native Populations From the Amazon Reveals Patterns on the Peopling of South America by André M. Ribeiro-dos-Santos, Amanda Ferreira Vidal, Tatiana Vinasco-Sandoval, João Guerreiro, Sidney Santos, Sidney Santos, Ândrea Ribeiro-dos-Santos, Ândrea Ribeiro-dos-Santos, Sandro J. de Souza, Sandro J. de Souza, Sandro J. de Souza

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Identification of rare alternative splicing events in MS/MS data reveals a significant fraction of alternative translation initiation sites by José E. Kroll, Sandro J. de Souza, Gustavo A. de Souza

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Splicing Express: a software suite for alternative splicing analysis using next-generation sequencing data by Jose E. Kroll, Jihoon Kim, Lucila Ohno-Machado, Sandro J. de Souza

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A New Approach for Identification of Cancer-related Pathways using Protein Networks and Genomic Data by André Fonseca, Marco D. Gubitoso, Marcelo S. Reis, Sandro J. De Souza, Junior Barrera

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A New Approach for Identification of Cancer-related Pathways using Protein Networks and Genomic Data by André Fonseca, Marco D. Gubitoso, Marcelo S. Reis, Sandro J. de Souza, Junior Barrera

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Mutation Detection in Tumor-Derived Cell Free DNA Anticipates Progression in a Patient With Metastatic Colorectal Cancer by Bruna D. de Figueiredo Barros, Bruna E. C. Kupper, Samuel Aguiar Junior, Celso A. L. de Mello, Maria D. Begnami, Rubens Chojniak, Sandro J. de Souza, Sandro J. de Souza, Giovana T. Torrezan, Dirce M. Carraro

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neoANT-HILL: an integrated tool for identification of potential neoantigens by Ana Carolina M. F. Coelho, André L. Fonseca, Danilo L. Martins, Paulo B. R. Lins, Lucas M. da Cunha, Sandro J. de Souza

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S-score: a scoring system for the identification and prioritization of predicted cancer genes. by Jorge E S de Souza, André F Fonseca, Renan Valieris, Dirce M Carraro, Jean Y J Wang, Richard D Kolodner, Sandro J de Souza

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Gene copy-number polymorphism caused by retrotransposition in humans. by Daniel R Schrider, Fabio C P Navarro, Pedro A F Galante, Raphael B Parmigiani, Anamaria A Camargo, Matthew W Hahn, Sandro J de Souza

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Complex Landscape of Germline Variants in Brazilian Patients With Hereditary and Early Onset Breast Cancer by Giovana T. Torrezan, Giovana T. Torrezan, Fernanda G. dos Santos R. de Almeida, Márcia C. P. Figueiredo, Bruna D. de Figueiredo Barros, Cláudia A. A. de Paula, Renan Valieris, Jorge E. S. de Souza, Jorge E. S. de Souza, Jorge E. S. de Souza, Rodrigo F. Ramalho, Felipe C. C. da Silva, Elisa N. Ferreira, Elisa N. Ferreira, Amanda F. de Nóbrega, Paula S. Felicio, Maria I. Achatz, Maria I. Achatz, Sandro J. de Souza, Sandro J. de Souza, Sandro J. de Souza, Edenir I. Palmero, Edenir I. Palmero, Dirce M. Carraro, Dirce M. Carraro

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Family-based whole-exome sequencing identifies rare variants potentially related to cutaneous melanoma predisposition in Brazilian melanoma-prone families. by Felipe Fidalgo, Giovana Tardin Torrezan, Bianca Costa Soares de Sá, Bruna Durães de Figueiredo Barros, Luciana Facure Moredo, Renan Valieris, Sandro J de Souza, João Pereira Duprat, Ana Cristina Victorino Krepischi, Dirce Maria Carraro

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A genetic network that suppresses genome rearrangements in Saccharomyces cerevisiae and contains defects in cancers by Christopher D. Putnam, Anjana Srivatsan, Rahul V. Nene, Sandra L. Martinez, Sarah P. Clotfelter, Sara N. Bell, Steven B. Somach, Jorge E.S. de Souza, André F. Fonseca, Sandro J. de Souza, Richard D. Kolodner

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Assessment of somatic mutations in urine and plasma of Wilms tumor patients by Ana Carolina Kerekes Miguez, Bruna D. de Figueiredo Barros, Jorge E. S. deSouza, Cecília Maria L. daCosta, Isabela Werneck Cunha, Paula Nicole Vieira P. Barbosa, Maria Lúcia P. Apezzato, Sandro J. deSouza, Dirce Maria Carraro

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High-throughput sequencing of a South American Amerindian. by André M Ribeiro-dos-Santos, Jorge Estefano Santana de Souza, Renan Almeida, Dayse O Alencar, Maria Silvanira Barbosa, Leonor Gusmão, Wilson A Silva, Sandro J de Souza, Artur Silva, Ândrea Ribeiro-dos-Santos, Sylvain Darnet, Sidney Santos

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Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types by André L. Fonseca, Vandeclécio L. da Silva, Marbella M. da Fonsêca, Isabella T. J. Meira, Thayná E. da Silva, José E. Kroll, André M. Ribeiro-dos-Santos, Cléber R. Freitas, Raimundo Furtado, Jorge E. de Souza, Beatriz Stransky, Sandro J. de Souza

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The Complete Mitogenome of Amazonian <i>Hyphessobrycon heterorhabdus</i> (Characiformes: Characidae) as a Valuable Resource for Phylogenetic Analyses of Characidae by Luciano Fogaça de Assis Montag, Ricardo Koroiva, Ândrea Ribeiro-dos-Santos, Leandro Magalhães, Giovanna C. Cavalcante, Caio S. Silva, Sávio Guerreiro, Daniel H. F. Gomes, Jorge E. S. de Souza, Sandro J. de Souza, Lidia Brasil Seabra, Maria Dayanne Lima de Lucena, Erival Gonçalves Prata, Izabella Cristina da Silva Penha, Thaisa Sala Michelan, Raphael Ligeiro, Leandro Juen

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Integrative annotation of 21,037 human genes validated by full-length cDNA clones. by Tadashi Imanishi, Takeshi Itoh, Yutaka Suzuki, Claire O'Donovan, Satoshi Fukuchi, Kanako O Koyanagi, Roberto A Barrero, Takuro Tamura, Yumi Yamaguchi-Kabata, Motohiko Tanino, Kei Yura, Satoru Miyazaki, Kazuho Ikeo, Keiichi Homma, Arek Kasprzyk, Tetsuo Nishikawa, Mika Hirakawa, Jean Thierry-Mieg, Danielle Thierry-Mieg, Jennifer Ashurst, Libin Jia, Mitsuteru Nakao, Michael A Thomas, Nicola Mulder, Youla Karavidopoulou, Lihua Jin, Sangsoo Kim, Tomohiro Yasuda, Boris Lenhard, Eric Eveno, Yoshiyuki Suzuki, Chisato Yamasaki, Jun-ichi Takeda, Craig Gough, Phillip Hilton, Yasuyuki Fujii, Hiroaki Sakai, Susumu Tanaka, Clara Amid, Matthew Bellgard, Maria de Fatima Bonaldo, Hidemasa Bono, Susan K Bromberg, Anthony J Brookes, Elspeth Bruford, Piero Carninci, Claude Chelala, Christine Couillault, Sandro J de Souza, Marie-Anne Debily, Marie-Dominique Devignes, Inna Dubchak, Toshinori Endo, Anne Estreicher, Eduardo Eyras, Kaoru Fukami-Kobayashi, Gopal R Gopinath, Esther Graudens, Yoonsoo Hahn, Michael Han, Ze-Guang Han, Kousuke Hanada, Hideki Hanaoka, Erimi Harada, Katsuyuki Hashimoto, Ursula Hinz, Momoki Hirai, Teruyoshi Hishiki, Ian Hopkinson, Sandrine Imbeaud, Hidetoshi Inoko, Alexander Kanapin, Yayoi Kaneko, Takeya Kasukawa, Janet Kelso, Paul Kersey, Reiko Kikuno, Kouichi Kimura, Bernhard Korn, Vladimir Kuryshev, Izabela Makalowska, Takashi Makino, Shuhei Mano, Regine Mariage-Samson, Jun Mashima, Hideo Matsuda, Hans-Werner Mewes, Shinsei Minoshima, Keiichi Nagai, Hideki Nagasaki, Naoki Nagata, Rajni Nigam, Osamu Ogasawara, Osamu Ohara, Masafumi Ohtsubo, Norihiro Okada, Toshihisa Okido, Satoshi Oota, Motonori Ota, Toshio Ota, Tetsuji Otsuki, Dominique Piatier-Tonneau, Annemarie Poustka, Shuang-Xi Ren, Naruya Saitou, Katsunaga Sakai, Shigetaka Sakamoto, Ryuichi Sakate, Ingo Schupp, Florence Servant, Stephen Sherry, Rie Shiba, Nobuyoshi Shimizu, Mary Shimoyama, Andrew J Simpson, Bento Soares, Charles Steward, Makiko Suwa, Mami Suzuki, Aiko Takahashi, Gen Tamiya, Hiroshi Tanaka, Todd Taylor, Joseph D Terwilliger, Per Unneberg, Vamsi Veeramachaneni, Shinya Watanabe, Laurens Wilming, Norikazu Yasuda, Hyang-Sook Yoo, Marvin Stodolsky, Wojciech Makalowski, Mitiko Go, Kenta Nakai, Toshihisa Takagi, Minoru Kanehisa, Yoshiyuki Sakaki, John Quackenbush, Yasushi Okazaki, Yoshihide Hayashizaki, Winston Hide, Ranajit Chakraborty, Ken Nishikawa, Hideaki Sugawara, Yoshio Tateno, Zhu Chen, Michio Oishi, Peter Tonellato, Rolf Apweiler, Kousaku Okubo, Lukas Wagner, Stefan Wiemann, Robert L Strausberg, Takao Isogai, Charles Auffray, Nobuo Nomura, Takashi Gojobori, Sumio Sugano

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